ggKbase home page

SCN18_14_9_16_R1_B_scaffold_410

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_410_1
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

215..349
DNA (135bp) protein (45aa)
SCN18_14_9_16_R1_B_scaffold_410_2
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

593..847
DNA (255bp) protein (85aa)
Putative transcriptional regulator n=1 Tax=Flavobacterium sp. CF136 RepID=J3C6R7_9FLAO
Putative transcriptional regulator {ECO:0000313|EMBL:EJL65416.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
ArsR family transcription regulator
SCN18_14_9_16_R1_B_scaffold_410_3
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

852..1508
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI00038128A9
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AGC78567.1}; TaxID=592029 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6); (Donghaeana dokdonensis).;"
SCN18_14_9_16_R1_B_scaffold_410_4
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1558..2103
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4M7_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07365.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCN18_14_9_16_R1_B_scaffold_410_5
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2106..3710)
DNA (1605bp) protein (535aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2L8_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA90230.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_410_6
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3902..4486
DNA (585bp) protein (195aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VW97_9FLAO
nicotinate nucleotide adenylyltransferase
SCN18_14_9_16_R1_B_scaffold_410_7
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4498..4842
DNA (345bp) protein (115aa)
Integral membrane protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KSW0_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF11634.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
integral membrane protein
SCN18_14_9_16_R1_B_scaffold_410_8
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5176..7380
DNA (2205bp) protein (735aa)
TonB-dependent receptor n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VW93_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:KEY18592.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
TonB-dependent receptor
SCN18_14_9_16_R1_B_scaffold_410_9
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7465..8388)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K7B5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL76110.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_410_10
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8455..9117
DNA (663bp) protein (221aa)
Probable copper homeostasis protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2L2_FLAB3
Copper homeostasis protein {ECO:0000313|EMBL:KIA89864.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
copper homeostasis protein
SCN18_14_9_16_R1_B_scaffold_410_11
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9132..10184)
DNA (1053bp) protein (351aa)
N-Dimethylarginine dimethylaminohydrolase n=4 Tax=Riemerella anatipestifer RepID=F0TNN6_RIEAR
Cytochrome C biogenesis protein CcmF {ECO:0000313|EMBL:KEY18596.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_410_12
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10316..11839
DNA (1524bp) protein (508aa)
Serine protease, HtrA/DegQ/DegS family n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2L0_FLAB3
Protease {ECO:0000313|EMBL:KIA90229.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
serine protease, HtrA/DegQ/DegS family
SCN18_14_9_16_R1_B_scaffold_410_13
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11936..12382)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2K9_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08672.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCN18_14_9_16_R1_B_scaffold_410_14
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12383..12763)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP, putative n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CQH0_9FLAO
DfrA {ECO:0000313|EMBL:KIA89850.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
endoribonuclease L-PSP
SCN18_14_9_16_R1_B_scaffold_410_15
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12909..15533)
DNA (2625bp) protein (875aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2K7_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA89849.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_410_16
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15552..16829
DNA (1278bp) protein (426aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ACU08669.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ACU08669.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2K6_FLAB3
SCN18_14_9_16_R1_B_scaffold_410_trna_1
unknown

Not on your lists

16887..16958
DNA (72bp)
transferRNA Glu
SCN18_14_9_16_R1_B_scaffold_410_17
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


17022..17300
DNA (279bp) protein (93aa)
30S ribosomal protein S20 n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K7I6_9FLAO
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
SSU ribosomal protein S20p
SCN18_14_9_16_R1_B_scaffold_410_trna_2
unknown

Not on your lists

17316..17387
DNA (72bp)
transferRNA Glu
SCN18_14_9_16_R1_B_scaffold_410_18
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17461..22587)
DNA (5127bp) protein (1709aa)
Helicase C-terminal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Y9_9FLAO
SNF2 family helicase {ECO:0000313|EMBL:CDN75398.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_410_19
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22580..23260)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003731DCF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL47475.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCN18_14_9_16_R1_B_scaffold_410_20
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23336..25708)
DNA (2373bp) protein (791aa)
Putative uncharacterized protein n=3 Tax=Elizabethkingia anophelis RepID=H0KWE8_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL47476.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCN18_14_9_16_R1_B_scaffold_410_21
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25721..26443)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Z2_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN75395.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
SCN18_14_9_16_R1_B_scaffold_410_22
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26433..27281)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003705739
Uncharacterized protein {ECO:0000313|EMBL:CDN75394.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
Peptidase, M23/M37 family
SCN18_14_9_16_R1_B_scaffold_410_23
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27271..29265)
DNA (1995bp) protein (665aa)
mobilization protein n=1 Tax=Empedobacter brevis RepID=UPI0003678F5E
Type IV coupling protein (T4CP) {ECO:0000313|EMBL:CDN75393.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
Putative mobilization protein
SCN18_14_9_16_R1_B_scaffold_410_24
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29272..29511)
DNA (240bp) protein (80aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL47480.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCN18_14_9_16_R1_B_scaffold_410_25
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29514..30383)
DNA (870bp) protein (290aa)
Conjugative transposon TraN protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Z5_9FLAO
Conjugative transposon protein TraN
Conjugative transposon protein TraN {ECO:0000313|EMBL:AIL47481.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCN18_14_9_16_R1_B_scaffold_410_26
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30386..31600)
DNA (1215bp) protein (405aa)
Putative conjugative transposon TraM protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZQ9_9FLAO
Conjugative transposon protein TraM
Conjugative transposon protein TraM {ECO:0000313|EMBL:AIL47482.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCN18_14_9_16_R1_B_scaffold_410_27
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31590..31943)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000366BA1B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL47483.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCN18_14_9_16_R1_B_scaffold_410_28
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31946..32560)
DNA (615bp) protein (205aa)
Conjugative transposon TraK protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZR1_9FLAO
Conjugative transposon protein TraK
Conjugative transposon protein TraK {ECO:0000313|EMBL:AIL47484.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
Displaying items 1-30 of 46 in total

View Taxonomy