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SCN18_14_9_16_R2_B_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 399 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_38_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..146
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08240.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_14_9_16_R2_B_scaffold_38_2
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

362..2197
DNA (1836bp) protein (612aa)
Probable potassium transport system protein kup n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9YY86_9NEIS
kup2; potassium transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2204..2701)
DNA (498bp) protein (166aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_4
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2890..4137
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000365175A
Virulence factor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_5
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4151..5575
DNA (1425bp) protein (475aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9Y4J8_AZOVI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_6
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5627..8593
DNA (2967bp) protein (989aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGL8_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_7
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8598..11264
DNA (2667bp) protein (889aa)
Conserved virulence factor protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGL9_AZOBR
conserved virulence factor protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_8
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11273..12397
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGM0_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12414..12818)
DNA (405bp) protein (135aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12995..14164
DNA (1170bp) protein (390aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMA0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14504..15523
DNA (1020bp) protein (340aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8II33_METNO
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL57902.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_14_9_16_R2_B_scaffold_38_12
unknown

Not on your lists

15685..16011
DNA (327bp) protein (109aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_38_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16024..16410)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI00035E0065
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16571..16873)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003772F7A
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17048..18883)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F50BB0
Monooxygenase {ECO:0000313|EMBL:KJC47093.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
monooxygenase
SCN18_14_9_16_R2_B_scaffold_38_16
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19062..20591
DNA (1530bp) protein (510aa)
putative transcriptional regulator (EC:4.6.1.1)
regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003739841
Adenylate cyclase {ECO:0000313|EMBL:AHY50530.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCN18_14_9_16_R2_B_scaffold_38_17
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20588..21577)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S2A2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD88329.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCN18_14_9_16_R2_B_scaffold_38_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21590..22387)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003625D72
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46322.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
short-chain dehydrogenase/reductase SDR
SCN18_14_9_16_R2_B_scaffold_38_19
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22531..24846)
DNA (2316bp) protein (772aa)
Xanthine dehydrogenase, molybdopterin binding subunit n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4Z3_9PROT
xanthine dehydrogenase molybdopterin binding subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24843..26225)
DNA (1383bp) protein (461aa)
Probable xanthine dehydrogenase protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIY6_9PROT
xanthine dehydrogenase small subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_21
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26346..27245
DNA (900bp) protein (300aa)
Polysaccharide deacetylase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF6_9PROT
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDP65343.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
polysaccharide deacetylase family protein
SCN18_14_9_16_R2_B_scaffold_38_22
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27247..28170
DNA (924bp) protein (308aa)
Chitooligosaccharide deacetylase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF5_9PROT
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_23
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28195..29424
DNA (1230bp) protein (410aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4J0_9BURK
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_14_9_16_R2_B_scaffold_38_24
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29441..30313
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Burkholderia sp. BT03 RepID=J2IZK9_9BURK
branched chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_14_9_16_R2_B_scaffold_38_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30310..31272
DNA (963bp) protein (321aa)
Amino acid ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7E0_AZOC5
amino acid ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_14_9_16_R2_B_scaffold_38_26
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31280..32008
DNA (729bp) protein (243aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003719421
ABC transporter
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_14_9_16_R2_B_scaffold_38_27
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32001..32702
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F0T5_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHK68115.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
braG1; high-affinity branched-chain amino acid transport ATP-binding protein BRAG 1
SCN18_14_9_16_R2_B_scaffold_38_28
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32706..34358)
DNA (1653bp) protein (551aa)
peptidase M14, carboxypeptidase A (EC:3.4.17.1)
Peptidase M14, carboxypeptidase A n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AES6_COLFT
Zinc carboxypeptidase {ECO:0000313|EMBL:KFC72206.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_14_9_16_R2_B_scaffold_38_29
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34378..35529)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E2D856
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_38_30
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35547..36572)
DNA (1026bp) protein (342aa)
Peptidase S58 DmpA n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ENC9_METSB
peptidase S58 DmpA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 399 in total

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