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SCN18_14_9_16_R2_B_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_238_1
unknown

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_238_2
unknown

Not on your lists

434..655
DNA (222bp) protein (74aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_238_3
unknown

Not on your lists

675..863
DNA (189bp) protein (63aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_238_4
unknown

Not on your lists

1060..1149
DNA (90bp) protein (30aa)
SCN18_14_9_16_R2_B_scaffold_238_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1162..2889
DNA (1728bp) protein (576aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036BA2CB
kdpA; potassium translocating ATPase subunit A
SCN18_14_9_16_R2_B_scaffold_238_6
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2904..4973
DNA (2070bp) protein (690aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Potassium-transporting ATPase B chain n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUX9_AZOBR
kdpB; potassium translocating ATPase, subunit B
SCN18_14_9_16_R2_B_scaffold_238_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4981..5586
DNA (606bp) protein (202aa)
potassium-transporting ATPase C (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000255|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000255|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
Potassium-transporting ATPase C chain n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=ATKC_METRJ
SCN18_14_9_16_R2_B_scaffold_238_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5602..8286
DNA (2685bp) protein (895aa)
Osmosensitive K+ channel sensor histidine kinase (Two-component system with KdpE) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDP0_AZOL4
kdpD; Osmosensitive K+ channel sensor histidine kinase (two-component system with KdpE)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8297..8980
DNA (684bp) protein (228aa)
Fis family transcriptional regulator n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000379F6D2
two-component transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_10
unknown

Not on your lists

comp(8987..9451)
DNA (465bp) protein (155aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_238_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9613..10008
DNA (396bp) protein (132aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] id=14625236 bin=bin7_NC10_sister species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10010..10927
DNA (918bp) protein (306aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EU9_RHOPS
hemH; phosphoribosylaminoimidazole-succinocarboxamide synthase
SCN18_14_9_16_R2_B_scaffold_238_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10922..11191)
DNA (270bp) protein (90aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_14
unknown

Not on your lists

comp(11264..12001)
DNA (738bp) protein (246aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_238_15
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12105..14423)
DNA (2319bp) protein (773aa)
Heavy metal translocating P-type ATPase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A391_STAND
ATPase P
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_16
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14462..14734
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HVA4_AZOC5
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_17
Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14735..15106)
DNA (372bp) protein (124aa)
Putative transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U0D2_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:ENN83863.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCN18_14_9_16_R2_B_scaffold_238_18
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15212..16093
DNA (882bp) protein (294aa)
Glyoxalase-like domain protein {ECO:0000313|EMBL:AIA15193.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCN18_14_9_16_R2_B_scaffold_238_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16104..17078)
DNA (975bp) protein (325aa)
Extra-cytoplasmic solute receptor family protein 13 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HE89_ACHXA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR75367.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
extra-cytoplasmic solute receptor family protein 13
SCN18_14_9_16_R2_B_scaffold_238_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17217..18353
DNA (1137bp) protein (379aa)
acyl-CoA transferase (EC:2.8.3.16)
Probable acyl-CoA transferase/carnitine dehydratase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IV77_BORPD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_21
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18470..19186)
DNA (717bp) protein (239aa)
Hydrolase, alpha n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TM54_TISMK
bioH; hydrolase, alpha
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_22
SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, Phage

Not on your lists

19244..20392
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVS6_AZOBR
membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_23
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20392..21159
DNA (768bp) protein (256aa)
Acyl-CoA thioesterase I (EC:3.1.2.-)
Lipolytic enzyme, G-D-S-L n=1 Tax=Rhodovulum sp. PH10 RepID=J6J0Q0_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_24
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21186..21962
DNA (777bp) protein (259aa)
Cyclase n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZXJ9_9PSED
cyclase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_14_9_16_R2_B_scaffold_238_25
SCNPILOT_EXPT_750_P_Thiobacillus_65_1100, SCNPILOT_EXPT_750_P_Thiobacillus_65_1100, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21974..22372)
DNA (399bp) protein (133aa)
Putative cytochrome c n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I4P1_BORPD
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:CAP41012.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCN18_14_9_16_R2_B_scaffold_238_26
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22396..22983)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W3Z6_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ03182.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
SCN18_14_9_16_R2_B_scaffold_238_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23150..24097
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K7M2_CUPNH
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KDP87506.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like
SCN18_14_9_16_R2_B_scaffold_238_28
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24089..24637)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTT6_9BRAD
Cation/multidrug efflux pump
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24665..25243)
DNA (579bp) protein (193aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_238_30
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25246..26007)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KK36_9PROT
class II aldolase/adducin domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 98 in total

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