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SCN18_26_2_15_R4_B_scaffold_14

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Displaying items 1-30 of 646 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R4_B_scaffold_14_1
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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99..464
DNA (366bp) protein (122aa)
SCN18_26_2_15_R4_B_scaffold_14_2
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

784..3837
DNA (3054bp) protein (1018aa)
TonB-dependent outer membrane receptor oar-like transmembrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y6_9GAMM
TonB-dependent outer membrane receptor oar-like transmembrane protein {ECO:0000313|EMBL:EIL94177.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent outer membrane receptor oar-like transmembrane protein
SCN18_26_2_15_R4_B_scaffold_14_3
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4241..4756)
DNA (516bp) protein (172aa)
Ni,Fe-hydrogenase III small subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NNL7_9GAMM
Ni,Fe-hydrogenase III small subunit
Ni,Fe-hydrogenase III small subunit {ECO:0000313|EMBL:AGG89286.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_14_4
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4764..6308)
DNA (1545bp) protein (515aa)
NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Rhodanobacter denitrificans RepID=I4WXA9_9GAMM
Ni,Fe-hydrogenase III large subunit
Ni,Fe-hydrogenase III large subunit {ECO:0000313|EMBL:AGG89285.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_14_5
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6313..7767)
DNA (1455bp) protein (485aa)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NEQ9_9GAMM
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:AGG89284.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_14_6
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7769..8434)
DNA (666bp) protein (222aa)
Hydrogenase 4 membrane component n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB1_9GAMM
hydrogenase 4 membrane component (E)
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:AGG89283.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_14_7
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8438..9391)
DNA (954bp) protein (318aa)
Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB2_9GAMM
formate hydrogenlyase subunit 4
Formate hydrogenlyase subunit 4 {ECO:0000313|EMBL:AGG89282.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_14_8
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9388..11403)
DNA (2016bp) protein (672aa)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NNL2_9GAMM
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:AGG89281.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_14_9
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11521..11736
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D94FB2
CopG family transcriptional regulator
CopG family transcriptional regulator {ECO:0000313|EMBL:AIF48875.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCN18_26_2_15_R4_B_scaffold_14_10
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11972..12817)
DNA (846bp) protein (282aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL35810.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
Cytochrome c fa id=2495481 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCN18_26_2_15_R4_B_scaffold_14_11
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13225..13596
DNA (372bp) protein (124aa)
Rhodanese-like protein n=1 Tax=uncultured bacterium A1Q1_fos_600 RepID=L7VVU4_9BACT
Rhodanese-like protein {ECO:0000313|EMBL:AGC71168.1}; TaxID=1256587 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_600.;"
rhodanese domain-containing protein
SCN18_26_2_15_R4_B_scaffold_14_12
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13645..13995
DNA (351bp) protein (117aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
Alkylhydroperoxidase like protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URR6_PSEUP
alkylhydroperoxidase
SCN18_26_2_15_R4_B_scaffold_14_13
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14278..14676)
DNA (399bp) protein (133aa)
Endoribonuclease L-PSP n=1 Tax=Brenneria sp. EniD312 RepID=G7LM09_9ENTR
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHD22986.1}; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Brenneria.;" source="Brenneria sp. EniD312.;"
putative translation initiation inhibitor, yjgF family
SCN18_26_2_15_R4_B_scaffold_14_14
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14831..15733
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003753A16
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEV27755.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCN18_26_2_15_R4_B_scaffold_14_15
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16058..16711)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium 9_2_54FAA RepID=E5YF61_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFV41419.2}; TaxID=469613 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium 9_2_54FAA.;"
hypothetical protein
SCN18_26_2_15_R4_B_scaffold_14_16
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16988..19204
DNA (2217bp) protein (739aa)
TonB-dependent receptor n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWU7_9PROT
TonB-dependent receptor {ECO:0000313|EMBL:EGY02259.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
TonB-dependent receptor
SCN18_26_2_15_R4_B_scaffold_14_17
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19262..20314
DNA (1053bp) protein (351aa)
Peptidase M61 domain-containing protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWU6_9PROT
Peptidase M61 domain-containing protein {ECO:0000313|EMBL:EGY02258.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
peptidase M61 domain-containing protein
SCN18_26_2_15_R4_B_scaffold_14_trna_10
unknown

Not on your lists

comp(20399..20480)
DNA (82bp)
transferRNA Leu
SCN18_26_2_15_R4_B_scaffold_14_18
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20492..20944)
DNA (453bp) protein (151aa)
Preprotein translocase subunit SecG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI12_9GAMM
Preprotein translocase subunit SecG {ECO:0000313|EMBL:EIL99103.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein translocase subunit secG
SCN18_26_2_15_R4_B_scaffold_14_19
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20963..21712)
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG2_9GAMM
SCN18_26_2_15_R4_B_scaffold_14_20
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21823..22632
DNA (810bp) protein (270aa)
Oxidoreductase, short-chain dehydrogenase/reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN87_9GAMM
Oxidoreductase, short-chain dehydrogenase/reductase {ECO:0000313|EMBL:EIL88678.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase
SCN18_26_2_15_R4_B_scaffold_14_21
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22843..23778)
DNA (936bp) protein (312aa)
flavonol synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C932E
Dioxygenase, isopenicillin N synthase {ECO:0000313|EMBL:EIL88680.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
flavonol synthase
SCN18_26_2_15_R4_B_scaffold_14_22
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23900..25246)
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphoglucosamine mutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXF8_9GAMM
phosphoglucosamine mutase
SCN18_26_2_15_R4_B_scaffold_14_23
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25326..26240)
DNA (915bp) protein (305aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
dihydropteroate synthase n=1 Tax=Dyella japonica RepID=UPI000304A180
dihydropteroate synthase
SCN18_26_2_15_R4_B_scaffold_14_24
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26237..26803)
DNA (567bp) protein (189aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Oligoribonuclease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN92_9GAMM
oligoribonuclease
SCN18_26_2_15_R4_B_scaffold_14_25
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26886..28322
DNA (1437bp) protein (479aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
exonuclease I (EC:3.1.11.1)
Exonuclease I n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN93_9GAMM
SCN18_26_2_15_R4_B_scaffold_14_26
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28353..29039
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN94_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88685.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCN18_26_2_15_R4_B_scaffold_14_27
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29006..30349)
DNA (1344bp) protein (448aa)
Major facilitator transporter (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIS7_9GAMM
Major facilitator transporter {ECO:0000313|EMBL:EIL87118.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
MFS transporter
SCN18_26_2_15_R4_B_scaffold_14_28
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30820..31566
DNA (747bp) protein (249aa)
Aquaporin Z n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI01_9GAMM
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MIP family channel protein
SCN18_26_2_15_R4_B_scaffold_14_29
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31616..32008)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E69476
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47984.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Displaying items 1-30 of 646 in total

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