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SCN18_26_2_15_R4_B_scaffold_397

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Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R4_B_scaffold_397_1
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

501..2003
DNA (1503bp) protein (501aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU6_9GAMM
SCN18_26_2_15_R4_B_scaffold_397_2
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2090..3025)
DNA (936bp) protein (312aa)
Sugar kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFE8_9GAMM
Sugar kinase {ECO:0000313|EMBL:EIL98189.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
sugar kinase, ribokinase
SCN18_26_2_15_R4_B_scaffold_397_3
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3299..4345
DNA (1047bp) protein (349aa)
Rod shape-determining protein MreB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU4_9GAMM
Rod shape-determining protein MreB {ECO:0000313|EMBL:EIL98335.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
rod shape-determining protein MreB
SCN18_26_2_15_R4_B_scaffold_397_4
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4358..5380
DNA (1023bp) protein (341aa)
Cell shape-determining protein MreC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU3_9GAMM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
rod shape-determining protein MreC
SCN18_26_2_15_R4_B_scaffold_397_5
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5377..5862
DNA (486bp) protein (162aa)
Rod shape-determining protein MreD n=1 Tax=Rhodanobacter denitrificans RepID=M4NDN6_9GAMM
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:AGG87568.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_397_6
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5878..7857
DNA (1980bp) protein (660aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQF7_9GAMM
Penicillin-binding protein 2 {ECO:0000313|EMBL:EIL89448.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCN18_26_2_15_R4_B_scaffold_397_7
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7854..8975
DNA (1122bp) protein (374aa)
Rod shape-determining protein RodA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR1_9GAMM
cell elongation-specific peptidoglycan biosynthesis regulator RodA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_26_2_15_R4_B_scaffold_397_8
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9079..10083
DNA (1005bp) protein (335aa)
Lytic murein transglycosylase B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR0_9GAMM
Lytic murein transglycosylase B {ECO:0000313|EMBL:EIL89551.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lytic murein transglycosylase
SCN18_26_2_15_R4_B_scaffold_397_9
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10080..11012
DNA (933bp) protein (311aa)
Rare lipoprotein A n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG0_9GAMM
Rare lipoprotein A {ECO:0000313|EMBL:EIL89451.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
lipoprotein
SCN18_26_2_15_R4_B_scaffold_397_10
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11081..12343
DNA (1263bp) protein (421aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG1_9GAMM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EIL89452.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
penicillin-binding protein 6
SCN18_26_2_15_R4_B_scaffold_397_11
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12343..12633
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAP3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87574.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_397_12
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12740..13447
DNA (708bp) protein (236aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Octanoyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAL4_9GAMM
lipoate-protein ligase B
SCN18_26_2_15_R4_B_scaffold_397_13
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13458..14477
DNA (1020bp) protein (340aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Lipoyl synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG4_9GAMM
lipoate synthase
SCN18_26_2_15_R4_B_scaffold_397_14
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14440..16725
DNA (2286bp) protein (762aa)
C-terminal processing peptidase n=3 Tax=Rhodanobacter denitrificans RepID=M4NCQ8_9GAMM
C-terminal processing peptidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_26_2_15_R4_B_scaffold_397_15
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16894..17502
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000315819B
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF49547.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCN18_26_2_15_R4_B_scaffold_397_16
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17750..19495)
DNA (1746bp) protein (582aa)
Aminopeptidase N n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG6_9GAMM
Aminopeptidase N {ECO:0000313|EMBL:EIL89457.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
aminopeptidase N
SCN18_26_2_15_R4_B_scaffold_397_17
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19645..21033)
DNA (1389bp) protein (463aa)
Leucine aminopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFS8_9GAMM
leucyl aminopeptidase
Leucine aminopeptidase {ECO:0000313|EMBL:EIL98319.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCN18_26_2_15_R4_B_scaffold_397_18
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21132..21830)
DNA (699bp) protein (233aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Rhodanobacter denitrificans RepID=M4NDP7_9GAMM
haloacid dehalogenase superfamily enzyme, subfamily IA
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:AGG87583.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_397_19
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21835..23172)
DNA (1338bp) protein (446aa)
Phosphate ABC transporter periplasmic protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN55_9GAMM
Phosphate ABC transporter periplasmic protein {ECO:0000313|EMBL:EIL88646.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ABC-type phosphate transport system, periplasmic component
SCN18_26_2_15_R4_B_scaffold_397_20
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23329..24711)
DNA (1383bp) protein (461aa)
Protease Do n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN56_9GAMM
Protease Do {ECO:0000313|EMBL:EIL88647.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
periplasmic serine protease, Do/DeqQ family
SCN18_26_2_15_R4_B_scaffold_397_21
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25049..28333
DNA (3285bp) protein (1095aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFS4_9GAMM
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EIL98315.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ribonucleotide reductase, alpha subunit
SCN18_26_2_15_R4_B_scaffold_397_22
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28379..28999
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDBAF
histidine biosynthesis protein HisIE
Uncharacterized protein {ECO:0000313|EMBL:AGG87587.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_26_2_15_R4_B_scaffold_397_23
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29260..30021
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95803.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
NrdJb
SCN18_26_2_15_R4_B_scaffold_397_24
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30763..31683
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Shewanella putrefaciens (strain 200) RepID=E6XLQ0_SHEP2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV56662.1}; TaxID=399804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella putrefaciens (strain 200).;"
SCN18_26_2_15_R4_B_scaffold_397_25
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31839..32318)
DNA (480bp) protein (160aa)
Universal stress protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYS3_PARL1
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ACQ94070.1}; Flags: Precursor;; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
SCN18_26_2_15_R4_B_scaffold_397_26
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32336..33550)
DNA (1215bp) protein (405aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
Acetate kinase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2KYN7_9PROT
acetate kinase
SCN18_26_2_15_R4_B_scaffold_397_27
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33735..34691)
DNA (957bp) protein (319aa)
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UV45_PSEUP
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase {ECO:0000313|EMBL:AER56325.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_26_2_15_R4_B_scaffold_397_28
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34688..37045)
DNA (2358bp) protein (786aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WC11_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37273.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCN18_26_2_15_R4_B_scaffold_397_29
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37042..37179)
DNA (138bp) protein (46aa)
SCN18_26_2_15_R4_B_scaffold_397_30
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37207..37959)
DNA (753bp) protein (251aa)
Acetoacetyl-CoA reductase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UV43_PSEUP
acetoacetyl-CoA reductase
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:AER56323.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
Displaying items 1-30 of 156 in total

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