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SCN18_30_10_14_R3_B_scaffold_989

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_989_1
CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, Mobile_element

Not on your lists

131..877
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F317D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_30_10_14_R3_B_scaffold_989_2
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1012..1311
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003680820
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_30_10_14_R3_B_scaffold_989_3
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1334..2215
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D8D51
RepA replication protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_30_10_14_R3_B_scaffold_989_4
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2421..3059
DNA (639bp) protein (213aa)
ParA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC195
ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_30_10_14_R3_B_scaffold_989_5
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3056..3301
DNA (246bp) protein (82aa)
parB partition protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E0639
parB partition protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_30_10_14_R3_B_scaffold_989_6
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3298..3831
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0AB2
transposase
Transposase {ECO:0000313|EMBL:AJP47690.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCN18_30_10_14_R3_B_scaffold_989_7
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3828..4352
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743BE1
peptidase
Peptidase {ECO:0000313|EMBL:AJP47689.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCN18_30_10_14_R3_B_scaffold_989_8
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4648..6597
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX8_POLNA
type VI secretion protein
Type VI secretion protein {ECO:0000313|EMBL:AJP47688.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCN18_30_10_14_R3_B_scaffold_989_9
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6739..6888)
DNA (150bp) protein (50aa)
SCN18_30_10_14_R3_B_scaffold_989_10
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7320..7583
DNA (264bp) protein (88aa)
Putative integral membrane protein n=1 Tax=Moorea producens 3L RepID=F4XNG2_9CYAN
Putative signal peptide protein {ECO:0000313|EMBL:CDI03471.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_989_11
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7586..8437
DNA (852bp) protein (284aa)
UPF0276 protein WQE_40134 n=1 Tax=Burkholderia terrae BS001 RepID=I5CH91_9BURK
UPF0276 protein BN874_1740007 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
h16_A1821; hypothetical protein
SCN18_30_10_14_R3_B_scaffold_989_12
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8421..9239
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CH92_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDH44556.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
h16_A1820; hypothetical protein
SCN18_30_10_14_R3_B_scaffold_989_13
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9267..9698
DNA (432bp) protein (144aa)
MerR family transcriptional regulator id=1311326 bin=GWE1_T_denit_62_9 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
merR regulatory family protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_30_10_14_R3_B_scaffold_989_14
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9691..9948
DNA (258bp) protein (86aa)
Thioredoxin/glutaredoxin id=1311325 bin=GWE1_T_denit_62_9 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thioredoxin/glutaredoxin
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_30_10_14_R3_B_scaffold_989_15
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10002..10616
DNA (615bp) protein (205aa)
Cytochrome c biogenesis protein, transmembrane region id=1311324 bin=GWE1_T_denit_62_9 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_30_10_14_R3_B_scaffold_989_16
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10618..11313
DNA (696bp) protein (232aa)
Putative cytochrome c biogenesis protein id=1311323 bin=GWE1_T_denit_62_9 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome C biogenesis transmembrane region family protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_30_10_14_R3_B_scaffold_989_17
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11353..11778
DNA (426bp) protein (142aa)
DUF1791 protein id=1311322 bin=GWE1_T_denit_62_9 species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_30_10_14_R3_B_scaffold_989_18
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11845..12426
DNA (582bp) protein (194aa)
Thiol:disulfide interchange protein DsbG n=2 Tax=Acidithiobacillus caldus RepID=F9ZS47_ACICS
Thiol:disulfide interchange protein DsbG
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_30_10_14_R3_B_scaffold_989_19
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12511..13008)
DNA (498bp) protein (166aa)
protein tyrosine phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D3EA5
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_30_10_14_R3_B_scaffold_989_20
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13026..13457)
DNA (432bp) protein (144aa)
protein tyrosine phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003619D35
protein tyrosine phosphatase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_30_10_14_R3_B_scaffold_989_21
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13487..13960)
DNA (474bp) protein (158aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=1320302 bin=GWE1_T_denit_62_9 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Glyoxalase/bleomycin resistance protein/dioxygenase
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_30_10_14_R3_B_scaffold_989_22
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13972..14310)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373C9BA
ArsR family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_30_10_14_R3_B_scaffold_989_23
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14504..15484
DNA (981bp) protein (327aa)
Phosphate ABC transporter substrate-binding protein, PhoT family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QUH6_9RHOB
Phosphate ABC transporter substrate-binding protein, PhoT family {ECO:0000313|EMBL:EPX83242.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
phosphate binding protein
SCN18_30_10_14_R3_B_scaffold_989_24
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15570..16517
DNA (948bp) protein (316aa)
PstC n=1 Tax=Sinorhizobium sp. M14 RepID=E9KN58_9RHIZ
PstC {ECO:0000313|EMBL:AFR74885.1}; Putative phosphate ABC transporter permease PstC inner membrane subunit {ECO:0000313|EMBL:ADO95179.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium sp. M14.;"
phosphate ABC transporter permease
SCN18_30_10_14_R3_B_scaffold_989_25
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16517..17476
DNA (960bp) protein (320aa)
Phosphate ABC transporter membrane protein 2, PhoT family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SAG1_9RHOB
Phosphate ABC transporter membrane protein 2, PhoT family {ECO:0000313|EMBL:EPX83244.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
phosphate ABC transporter permease
SCN18_30_10_14_R3_B_scaffold_989_26
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17497..18363
DNA (867bp) protein (289aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Phosphate ABC transporter ATPase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8H8_9RHIZ
phosphate ABC transporter ATPase
SCN18_30_10_14_R3_B_scaffold_989_27
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18381..19106
DNA (726bp) protein (242aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLZ4_9PROT
Phosphate uptake regulator, PhoU
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
SCN18_30_10_14_R3_B_scaffold_989_28
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19727..19843
DNA (117bp) protein (39aa)
SCN18_30_10_14_R3_B_scaffold_989_29
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19848..21134
DNA (1287bp) protein (429aa)
Arsenical pump membrane protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0BHP9_ALCFA
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
arsenical pump membrane protein
SCN18_30_10_14_R3_B_scaffold_989_30
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21307..21432
DNA (126bp) protein (42aa)
Displaying items 1-30 of 38 in total

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