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SCN18_30_10_14_R3_B_scaffold_1772_5

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(3345..7544)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=12498641 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1381.0
  • Bit_score: 2690
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 1399.0
  • Bit_score: 2610
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 1399.0
  • Bit_score: 2610
  • Evalue 0.0

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4200
ATGAAAGCACTGTTGGATCTGTTCAAGCAGGCCACCCACGAGGAAGAGTTCGACGCCATCAAGATCGGCCTGGCGTCGCCGGAAAAAATCCGTTCCTGGTCGTACGGCGAGGTCAAGAAGCCCGAGACCATCAACTACCGGACCTTCAAGCCCGAGCGCGATGGCCTGTTCTGCGCGAAGATCTTCGGCCCGGTGAAGGACTACGAGTGCTTGTGCGGCAAGTACAAGCGCCTCAAACACCGCGGTGTGATCTGCGAGAAGTGCGGGGTGGAAGTCACGCTGTCGAAAGTGCGCCGCGAGCGCATGGGCCACATCGAACTGGCCAGCCCGGTTGCCCATATCTGGTTCCTGAAGTCGCTGCCGTCACGTCTGGGCATGGTGCTCGACATGACGCTGCGCGATATCGAGCGCGTGCTGTACTTCGAAGGCTTCGTCGTCGTCGAGCCCGGCATGACCCCGTTGAACAAGGGCCAGTTGCTGACCGAAGAGGACTATCTCAACAAGCTCGAGGAATACGGTGACGAATTCCGTGCGCTGATGGGCGCGGAAGCCATCCGCGAACTGCTGCGCGGCATCGACCTGCACACCGAAGTCGAATCGCTGCATGCCGAAATCGGCAAGACCGGTTCGGACACCAAGCTCAAGAAGCTGTCGAAACGTCTGAAAATCCTGGAAGGCTTCCAGAAGTCCGGCATCAAGCCCGAGTGGATGATTCTCGAAGTATTGCCGGTGCTGCCGCCCGAGCTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGTTTCGCGACCTCGGACCTGAACGACCTGTATCGCCGCGTCATCAACCGCAATAACCGCCTGAAGCGCCTGCTGGAGCTTAAGGCCCCGGAAATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCTGTCGACTCGCTGCTCGACAACGGCCGTCGCGGCAAGGCAATGACCGGCGCCAACAAGCGCCCACTGAAGTCGCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGATTACTCCGGCCGTTCGGTCATCGTAGTGGGTCCGACGCTGAAGCTGCACCAGTGCGGCCTGCCGAAAAAGATGGCGCTCGAACTCTTCAAACCCTTCATCTTCAACCGCCTCGAAGTGCTGGGGCTGGCGACCACGATCAAGGCCGCCAAGAAGATGGTGGAGGACGAAGAACCGATCGTCTGGGATCTGCTGGAAGAAGTCATCCGCGAGCATCCGGTGATGCTGAACCGTGCGCCGACGCTGCACCGTCTGGGCATCCAGGCGTTCGAACCGGTGCTGATCGAAGGCAAGGCAATCCAGCTGCACCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTTCACGTACCGCTGTCGCTGGAAGCCCAGACCGAAGCCCGCACCCTGATGCTGGCGTCGAACAACGTGCTGTCGCCCGCCAACGGCGAACCCATCATCGTTCCCTCGCAGGACATCGTGCTGGGTCTGTATTACATGACGCGCGAAATGGTGAACGCGAAGGGCGAAGGCATGGTATTCGCCGACGTCGCCGAGGCCCGGCGCGCCTACGACAACCGTGTGGCCGACCTGCATGCGCGCGTGACCGTGCGCATCAAGGAGGTGACGCTCGACGAGAACAAGAACCGCGTCGAGACGATCAAGCGTGTGGAAACCACGCTGGGTCGTTCGCTGCTGTCCGAAATCCTGCCGCCCGGCCTTCCGTTCAGCCATGTCGACAAGGCGCTGAAGAAAAAGGAAATCTCCAAGCTCATCAACGCCAGCTTCCGCCGCTGCGGCCTGCGCGAGACCGTGATCTTCGCCGACAAGCTGATGTACACCGGCTTCACGTTCGCAACCCGTGCCGGCATGTCGATCGCGATCAAGGACATGCTGATTCCGGGCGAGAAGGACCAGATCCTCGGCGCCGCCGAAGCCGAGGTGAAGGAAATCGAGTCGCAGTACACCTCGGGTCTGGTGACCCAGGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGGCCGGGCCGGCGACGCCGTGGCCAAGGCCATGATGGCGCAACTGGGCGGCGAGAAGGTGACCGACCGTGCCGGCAAGGAAGTGACGCAGGAATCGTTCAACGCGATCTACATGATGGCCGACTCCGGCGCGCGCGGGTCCGCTGCACAGATTCGTCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAACCGGACGGCTCGATCATCGAAACGCCGATCACGGCGAACTTCCGCGAAGGCCTGAACATGCTTCAGTACTTCATCTCGACACACGGTGCACGTAAGGGCCTTGCCGATACCGCGCTGAAGACCGCGAACTCGGGTTACCTGACCCGCCGTCTGGTCGACGTGACGCAGGATCTGGTGGTGGTCGAGGACGATTGCGGCACCAAGAACGGCCTGGCGGTGAAGGCCCTGGTCGAAGGCGGCGAGGTCGTCGAGCCGCTGCGCGAGCGGATTCTCGGCCGCGTGGCTGCTTCGGACATCATCCATCCGGAATCTCAGGAAACCGTCTACGAAGCCGGGACGCTGCTGTCCGAAGACGTGGTCGACACCATCGAGGCGCTGGGCATCGACGAGGTCAAGGTGCGTACCCCACTGACCTGCGAAACGCGCTATGGCCTGTGCGCCAAGTGCTATGGCCGCGATCTCGGACGCGGCTATCTGGTCAATGCCGGCGAGGCGGTAGGGGTGATCGCCGCGCAGTCCATCGGCGAACCGGGCACGCAGCTGACCATGCGGACCTTCCACATCGGCGGCGCGGCCTCGCGTGCGGCGGCAGCCAGCCAGCTGGAAGCCAAGTCGAACGGCACGGTGCAATACACCGCGGCGATGCGCTACGTGACCAACGCGCGCAAGGAACTGGTCGCCATTTCGCGCAGCGGCGAGATTCTCATCGCCGACGACAGCGGCCGCGAACGCGAGCGTCACAAGGTGCCCTACGGCGCGACCCTGATGGTGACCGACGGTGCCAAGATCAAGGCCGGTGCGGTACTGGCCACCTGGGACCCGCATACCCGCCCGATCATCACCGAGTACGCTGGGCGTGTGCGTTTCGAAAACGTCGAGGAAGGCGTAACCGTCGCCAAGCAGGTGGACGACGTGACCGGTCTGTCGACGCTGGTTGTCATCGATCCCAAGCGCAAGGGCAGCAGCGCCAAGGGTGTGCGGCCGCAGGTCAAGCTGCTCGACGAGTCCGGCAGCGAAATCAAGATTGCCGGCACCGATACGCTGGTCAATATCACCTTCCAGATCGGTTCGATCATCACGGTCAAGGATGGTCAGGATGTCTCGGTCGGCGACGTGCTTGCGCGGATCCCGCAGGAATCGTCCAAGACCCGCGACATCACCGGTGGTCTGCCGCGCGTGGCCGAGCTGTTCGAGGCCCGCTCGCCCAAGGACGCCGGCGTGCTCGCCGAAGTGACCGGCACCGTCTCCTTCGGCAAGGACACCAAAGGCAAGCAGCGCCTGGTCATCACCGACATGGACGGCGTGCCGCACGAATATCTGATTACCAAGGAAAAACACGTCACCGCCCACGACGGCCAGATTGTCCAGAAGGGCGAGATGATCGTCGACGGCCCGGTCGATCCGCATGACATCCTGCGTCTGCAGGGGGTCGAGGCACTGGCACGCTACATCACCGACGAGGTGCAGGACGTCTATCGCCTTCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGGCAGATGCTGCGTCGCGTCACGGTTGCGGATCCGGGCGATACCGGCCTGATTCCGGGCGAGCAGATCGAGCGTTCCGAGGTGTTGCAGATCAACGACGAAATGCTCGCCAGCGAGAAGCAGCCGGCTACGTACGATCCGATCCTGCTCGGCATCACCAAGGCCTCGCTGTCGACGGATTCCTTCATTTCGGCGGCCTCCTTCCAGGAAACCACCCGTGTGCTCACCGAAGCCGCGATCATGGGCAAGAAGGACGAACTGCGCGGCCTGAAGGAAAACGTCATCGTCGGCCGCCTGATCCCAGCCGGCAGCGGCCTGGCCTACCACAACACGCGTCGCCGCCAGGCGGCCGGGGAAGACCTGGGTGCCGAACACCTGATCGAAGGCGGAGAGGACGCGAACCCGGCCGAAAACCAGGAGGTTGCTTGA
PROTEIN sequence
Length: 1400
MKALLDLFKQATHEEEFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEGFVVVEPGMTPLNKGQLLTEEDYLNKLEEYGDEFRALMGAEAIRELLRGIDLHTEVESLHAEIGKTGSDTKLKKLSKRLKILEGFQKSGIKPEWMILEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKKMALELFKPFIFNRLEVLGLATTIKAAKKMVEDEEPIVWDLLEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQTEARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTREMVNAKGEGMVFADVAEARRAYDNRVADLHARVTVRIKEVTLDENKNRVETIKRVETTLGRSLLSEILPPGLPFSHVDKALKKKEISKLINASFRRCGLRETVIFADKLMYTGFTFATRAGMSIAIKDMLIPGEKDQILGAAEAEVKEIESQYTSGLVTQGERYNKVVDIWGRAGDAVAKAMMAQLGGEKVTDRAGKEVTQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNMLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTKNGLAVKALVEGGEVVEPLRERILGRVAASDIIHPESQETVYEAGTLLSEDVVDTIEALGIDEVKVRTPLTCETRYGLCAKCYGRDLGRGYLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQLEAKSNGTVQYTAAMRYVTNARKELVAISRSGEILIADDSGRERERHKVPYGATLMVTDGAKIKAGAVLATWDPHTRPIITEYAGRVRFENVEEGVTVAKQVDDVTGLSTLVVIDPKRKGSSAKGVRPQVKLLDESGSEIKIAGTDTLVNITFQIGSIITVKDGQDVSVGDVLARIPQESSKTRDITGGLPRVAELFEARSPKDAGVLAEVTGTVSFGKDTKGKQRLVITDMDGVPHEYLITKEKHVTAHDGQIVQKGEMIVDGPVDPHDILRLQGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQMLRRVTVADPGDTGLIPGEQIERSEVLQINDEMLASEKQPATYDPILLGITKASLSTDSFISAASFQETTRVLTEAAIMGKKDELRGLKENVIVGRLIPAGSGLAYHNTRRRQAAGEDLGAEHLIEGGEDANPAENQEVA*