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SCN18_30_10_14_R3_B_scaffold_1772_6

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(7566..11645)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=12498641 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1357.0
  • Bit_score: 2660
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 1359.0
  • Bit_score: 2570
  • Evalue 0.0
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 1359.0
  • Bit_score: 2580
  • Evalue 0.0

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4080
ATGGCTTATACCTTTACCGAGAAAAAACGTCTGCGCAAGAGTTTCGCAAGCCGGACCAACACCCTTCCGGTGCCGTTTCTTCTGGCGACGCAGATTGAGTCCTACCGTTCCTTTCTGCAGGAAGGCCGCTCGAAGGAAGAGCGCCTGAACGAAGGGCTGCAGGCGGCGTTCACGTCGATTTTCCCCATCGTCAGCCACAGCGGCAACGCGCGCCTGGAGTATGTGAGCTACACGCTCGGCGAACCGGTGTTCGACATCAAGGAATGTCAGCAGCGCGGCCTGACCTACTGTGCGCCGCTGCGTGCCAAGGTGCGTCTGGTGATCATGGACAAGGAGGCGTCCAAGCCGACCATCAAGGAAGTGAAGGAGCAGGAAGTCTACATGGGCGAAATTCCGCTCATGACGCCGACCGGTTCCTTCGTCATCAACGGTACCGAGCGGGTGATCGTTTCCCAGCTGCACCGTTCGCCCGGCGTGTTCTTCGAGCACGACCGCGGCAAGACACACAGCTCGGGCAAGCTGCTGTTCTCGGCGCGCGTGATTCCCTATCGCGGCTCCTGGCTGGATTTCGAGTTCGACGCCAAGGACATCCTGTTCTTCCGTGTCGACCGCCGTCGCAAGATGCCGGTCAGTATCCTGCTCAAGGCGCTGGGCTATACGCCCGAAACCATTCTGGACGCATTCTTCAGCAAGGATACGTTCTACATCAACAGCCAGGGTGTCCAGTTCGAGCTGGTGCCCGAGCGTCTGCGCGGCGAAATCGCGCGCTTCGACATCTGTGGCAAGGACGACCACGTCATCGTCGCCAAGGACAAGCGCATCACCGCCAAGCACATCCGCGAACTGGATGCGGCAGGCGTCAAGAAATGGGCCGTACCGGCGGAATTCGTCGTCGGCCGTGTGCTGTCTCACGATGTCATCGACAAGGCTACGGGCGAACTGGTCGCACGCGCCAACGACGAGATCACCGAAGACCTGCTGAAGAAGCTGGGGGCGGCGGGCATCGACAAGTTCCAGACGCTGTACACCAACGATCTGGATCATGGTCCCTTCATTTCGCAGACGCTGCGTACCGACGACACCAGCGACGAATATGCCGCCAAAGTCGCGATCTACCGGATGATGCGGCCGGGCGAACCGCCGACCGAGGACGCGGTGAACGCACTGTTCGTCAACCTCTTCTTCAGCGAGGAACGCTACGACCTGTCGGCCGTGGGCCGCATGAAATTCAACCGCCGTATCGGCCGCGACGAATTGACGGGCACCGGCACGCTGTCGACCGAAGACATTGTCGCCGTCATCAAGATTCTGGTCGAGCTGCGCAACGGCCGGGGCGAAATCGACGACATCGACCACCTTGGCAACCGGCGCGTGCGTTCGGTCGGCGAACTGGCGGAAAACCAGTTCCGCGCCGGTCTGGTACGCGTCGAGCGTGCGGTGCGCGAGCGCCTGTCGCAGGCCGAGTCGGACAACCTGATGCCGCACGACCTGATCAATGCCAAGCCCGTCTCGGCCGCGATCAAGGAATTCTTCGGCTCGTCGCAGCTGAGCCAGTTCATGGACCAGACCAACCCGCTGTCGGAGATCACCCACAAGCGCCGCGTCTCGGCGCTGGGCCCTGGCGGTTTGACCCGCGAGCGTGCCGGCTTCGAGGTGCGCGACGTGCACCCGACCCACTACGGCCGCGTCTGCCCGATCGAAACGCCGGAAGGTCCGAACATCGGCCTGATCAATTCGCTCGCCCTGTTCGCGCGCACCAACTGGTACGGTTTCATCGAAACGCCGTACCGGAAAGTGGTCAACAACAAGGTCACGGACGAGATCGAATACCTGTCGGCGATCGAGGAAAGCAAGTACGTGATCGCCCAGGCCAACGCCGAACTCGACCCCAAGGGCAAGTTCAAGGACGATCTGGTGTCCTGCCGCCACAAGAACGAATTCACGCTGTCCTCGCCCGACAAGATCGAGTACATGGACGTGGCGCCGGCGCAGATCGTGTCGGTGGCCGCTTCGCTGATTCCCTTCCTCGAACACGACGATGCAAACCGCGCGCTGATGGGGTCGAACATGCAGCGTCAGGCCGTGCCCTGTCTGCGTCCCGAGAAGCCTTTCGTCGGTACGGGCATCGAGCGCACCGCGGCGGTCGATTCCGGCACGGTCGTCACCGCCTATCGCGGTGGCGTGGTCGACTACGTCGATGCCGGGCGCATCGTGATCCGGGTGCATGACGAGGAAGCGAAATCGGGCGAAGTCGGTGTCGACATCTATTCGCTGATCAAGTACACGCGGTCCAACCAGAACACCAACATCAACCAGCGTCCGCTGGTGAAGATCGGTGAAGTGATCGCGCGCGGCGACGTGATCGCCGACGGCGCCTCGACCGACATGGGCGAGCTGGCGCTCGGCCAGAACATGCTGGTCGCGTTCATGCCCTGGAACGGCTACAACTTCGAGGATTCGATCCTCATCAATGAGAAGGTCGTGGCCGAAGACCGCTATACCTCGATCCACATCGAGGAACTGTCGGTCGTGGCCCGCGACACCAAGCTCGGGCCCGAGGAAATCACCCGCGACATCTCCAACCTCGCCGAGCGCCAGCTCTCGCGTCTGGACGAGTCGGGCATCATCGCCATCGGTGCCGAGGTCGAGGCCGGCGACGTGCTGGTCGGCAAGGTCACGCCGAAGGGCGAAACCCAGCTCACGCCGGAAGAGAAACTCTTGCGCGCGATCTTCGGTGAGAAGGCATCCGACGTGAAAGACACATCGCTGAAGGTGCCGTCCGGCATGTCCGGTGTGGTCATCGACGTGCAGGTCTTCACCCGCGAAGGCATCGAGCGCGACAAGCGCGCGCAGTCGATCATCGATACCCAGCTGGCCGAATACAAGAAGGACCTGACCGACCGCATGCGTATCGTCGAGGACGATACCTTTGCGCGTCTCGAAAAACTGCTGCACCTGAAGGTGGCGAACGGCGGGCCCAAGAAACTTGCCAAGGGCAGCAAGGTGACGAAGGACTATCTGGAGTCGCTGAACCGCCACGACTGGTTCGACATCCGCCTGGCCGACGACGAAGCCAGCCGCCAGGTGGAGGCGATCAAGGACAGCCTCGCGCAGAAACGCATCGAGTTCGATGCCATGTTCGAAGAGAAGAAGAAGAAACTGACCGCGGGCGACGAGCTGCCGCCCGGCGTGCAGAAGATGGTCAAGGTCTACCTGGCGGTCAAGCGCCGCCTGCAGCCCGGCGACAAGATGGCCGGTCGGCACGGCAACAAGGGTGTGGTGTCGAAGATCGTACCGATCGAGGACATGCCCTTCATGGCAGACGGCCGTCCGGTCGACATCGTGCTGAACCCGCTCGGTGTTCCGTCGCGGATGAACGTGGGGCAGATTCTGGAAACCCACCTGGGGTGGGCGGCGAAGGGGCTGGGCGAGCAGATCGGCCGAATGCTGGCAGCGCAGACCAAGAGCCTGGTGAAGGAATTGCGCACTTTCCTGAAGGACGTCTACAACCAGTCCGGCAAGCAGGAAGAGATCGACGACTTCACCGACGACGAGATCATCGAGCTGGCGCGCAATCTCGAGAAGGGCGTGCCCTTCGCTTCGCCCGTGTTCGACGGTGCATCCGAAGCGGAAATCCGCCGCATGCTGCAGCTTGCCGGCCTGCCCGAGGGCGGCCAGGTTACGCTGTATGACGGCCGCACCGGCGAAGCCTTCGATCGTCAGGTCACCGTCGGCTACAAGCACGTGCTGAAGCTGCACCACCTGGTCGACGACAAGATGCACGCCCGCTCGACCGGTCCGTATTCGCTGGTCACGCAGCAACCGCTGGGCGGCAAGGCGCAGTTCGGCGGTCAGCGTTTCGGCGAAATGGAAGTGTGGGCGCTCGAAGCCTACGGCGCGTCCTACGTGCTGCAGGAAATGTTGACCGTGAAATCCGACGATGTGAACGGCCGGACCAAGGTCTACGAGAACATCGTCAAGGGCGATCACAAGATCGAGGCGGGCATGCCGGAATCCTTCAACGTGCTGGTGAAGGAAATCCGTTCGCTGGGCATCGACATCGATCTGGAACGTTATTAA
PROTEIN sequence
Length: 1360
MAYTFTEKKRLRKSFASRTNTLPVPFLLATQIESYRSFLQEGRSKEERLNEGLQAAFTSIFPIVSHSGNARLEYVSYTLGEPVFDIKECQQRGLTYCAPLRAKVRLVIMDKEASKPTIKEVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARVIPYRGSWLDFEFDAKDILFFRVDRRRKMPVSILLKALGYTPETILDAFFSKDTFYINSQGVQFELVPERLRGEIARFDICGKDDHVIVAKDKRITAKHIRELDAAGVKKWAVPAEFVVGRVLSHDVIDKATGELVARANDEITEDLLKKLGAAGIDKFQTLYTNDLDHGPFISQTLRTDDTSDEYAAKVAIYRMMRPGEPPTEDAVNALFVNLFFSEERYDLSAVGRMKFNRRIGRDELTGTGTLSTEDIVAVIKILVELRNGRGEIDDIDHLGNRRVRSVGELAENQFRAGLVRVERAVRERLSQAESDNLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALFARTNWYGFIETPYRKVVNNKVTDEIEYLSAIEESKYVIAQANAELDPKGKFKDDLVSCRHKNEFTLSSPDKIEYMDVAPAQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPFVGTGIERTAAVDSGTVVTAYRGGVVDYVDAGRIVIRVHDEEAKSGEVGVDIYSLIKYTRSNQNTNINQRPLVKIGEVIARGDVIADGASTDMGELALGQNMLVAFMPWNGYNFEDSILINEKVVAEDRYTSIHIEELSVVARDTKLGPEEITRDISNLAERQLSRLDESGIIAIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLKVPSGMSGVVIDVQVFTREGIERDKRAQSIIDTQLAEYKKDLTDRMRIVEDDTFARLEKLLHLKVANGGPKKLAKGSKVTKDYLESLNRHDWFDIRLADDEASRQVEAIKDSLAQKRIEFDAMFEEKKKKLTAGDELPPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPIEDMPFMADGRPVDIVLNPLGVPSRMNVGQILETHLGWAAKGLGEQIGRMLAAQTKSLVKELRTFLKDVYNQSGKQEEIDDFTDDEIIELARNLEKGVPFASPVFDGASEAEIRRMLQLAGLPEGGQVTLYDGRTGEAFDRQVTVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVKSDDVNGRTKVYENIVKGDHKIEAGMPESFNVLVKEIRSLGIDIDLERY*