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SCN18_31_3_15_R5_B_scaffold_1943

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R5_B_scaffold_1943_trna_1
unknown

Not on your lists

comp(4..77)
DNA (74bp)
transferRNA Ile
SCN18_31_3_15_R5_B_scaffold_1943_16S_1
unknown

Not on your lists

comp(220..1729)
DNA (1510bp)
16S ribosomal RNA (16S rRNA)
SCN18_31_3_15_R5_B_scaffold_1943_1
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1907..3097)
DNA (1191bp) protein (397aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=12494229 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_31_3_15_R5_B_scaffold_1943_2
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3268..4584
DNA (1317bp) protein (439aa)
peptidase family protein id=12494228 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
peptidase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_31_3_15_R5_B_scaffold_1943_3
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4581..5696
DNA (1116bp) protein (372aa)
anmK, ydhH; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] id=12494227 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
anmK; anhydro-N-acetylmuramic acid kinase
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_31_3_15_R5_B_scaffold_1943_4
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5779..6129)
DNA (351bp) protein (117aa)
HesB-like protein; K15724 iron-sulfur cluster insertion protein id=12494226 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
HesB-like protein
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000255|HAMAP-Rule:MF_01380}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_31_3_15_R5_B_scaffold_1943_5
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6486..7514)
DNA (1029bp) protein (343aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] id=12494225 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_31_3_15_R5_B_scaffold_1943_6
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7632..8024)
DNA (393bp) protein (131aa)
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=12494224 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rpsI; 30S ribosomal protein S9
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_31_3_15_R5_B_scaffold_1943_7
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8021..8467)
DNA (447bp) protein (149aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=12494223 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rplM; 50S ribosomal protein L13
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_31_3_15_R5_B_scaffold_1943_8
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8593..9270
DNA (678bp) protein (226aa)
transmembrane protein id=12494222 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ96405.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 10 items

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