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SCN18_31_3_15_R5_B_scaffold_2813

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R5_B_scaffold_2813_1
SCNPILOT_SOLID2_TRIM150_Plasmid_5, SCNPILOT_SOLID2_TRIM150_Plasmid_5, SCNPILOT_SOLID2_TRIM150_Plasmid_5, SCNPILOT_SOLID2_TRIM150_Plasmid_5, SCNPILOT_SOLID2_TRIM150_Plasmid_5, Plasmid-like

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1..141
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0D03
conjugal transfer protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_31_3_15_R5_B_scaffold_2813_2
SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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145..849
DNA (705bp) protein (235aa)
hypothetical protein id=1311307 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_31_3_15_R5_B_scaffold_2813_3
SCNPILOT_EXPT_500_P_Thiobacillus_plasmid_59_1336, SCNPILOT_EXPT_500_P_Thiobacillus_plasmid_59_1336, SCNPILOT_EXPT_500_P_Thiobacillus_plasmid_59_1336, SCNPILOT_EXPT_500_P_Thiobacillus_plasmid_59_1336, SCNPILOT_EXPT_500_P_Thiobacillus_plasmid_59_1336, Plasmid-like

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846..1931
DNA (1086bp) protein (362aa)
hypothetical protein id=1311308 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_31_3_15_R5_B_scaffold_2813_4
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1928..3223
DNA (1296bp) protein (432aa)
Conjugal transfer mating pair stabilization protein TraN id=1311309 bin=GWE1_T_denit_62_9 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
traN; conjugal transfer mating pair stabilization protein TraN
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_31_3_15_R5_B_scaffold_2813_5
SCNPILOT_SOLID2_TRIM150_Plasmid_5, SCNPILOT_SOLID2_TRIM150_Plasmid_5, SCNPILOT_SOLID2_TRIM150_Plasmid_5, SCNPILOT_SOLID2_TRIM150_Plasmid_5, SCNPILOT_SOLID2_TRIM150_Plasmid_5, Plasmid-like

Not on your lists

3234..3686
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FF0D7
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_31_3_15_R5_B_scaffold_2813_6
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3629..4498
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=1311311 bin=GWE1_T_denit_62_9 species=unknown genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_31_3_15_R5_B_scaffold_2813_7
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4513..5955
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368B064
conjugative transfer pilus assembly protein TraH
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_31_3_15_R5_B_scaffold_2813_8
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5962..6222
DNA (261bp) protein (87aa)
Uncharacterized protein id=1311313 bin=GWE1_T_denit_62_9 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
IncF plasmid conjugative transfer protein TraG
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_31_3_15_R5_B_scaffold_2813_9
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6164..6967
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365574A
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 9 items

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