ggKbase home page

SCN18_25_1_16_R1_B_scaffold_5296

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_5296_1
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..283)
DNA (282bp) protein (94aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J56_DECAR
Branched-chain amino acid transport system permease protein LivM
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM22990.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_5296_2
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(286..1161)
DNA (876bp) protein (292aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J55_DECAR
High-affinity branched-chain amino acid transport system permease protein LivH
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM22989.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_5296_3
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1509..2513)
DNA (1005bp) protein (335aa)
Phenylacetic acid degradation operon negative regulatory protein paaX n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J36_DECAR
Phenylacetic acid degradation operon negative regulatory protein PaaX
Phenylacetic acid degradation operon negative regulatory protein PaaX {ECO:0000313|EMBL:CDM22979.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_5296_4
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2485..2817)
DNA (333bp) protein (111aa)
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J54_DECAR
2-polyprenylphenol hydroxylase
2-polyprenylphenol hydroxylase {ECO:0000313|EMBL:CDM22980.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying 4 items

View Taxonomy