ggKbase home page

SCN18_25_1_16_R1_B_scaffold_4938

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_4938_1
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
oxidoreductase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B57825
2-keto-3-deoxy-L-fuconate dehydrogenase
2-keto-3-deoxy-L-fuconate dehydrogenase {ECO:0000313|EMBL:CDM23216.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_4938_2
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133..990
DNA (858bp) protein (286aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase (EC:4.1.1.68)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase {ECO:0000313|EMBL:CDM23217.1}; EC=4.1.1.68 {ECO:0000313|EMBL:CDM23217.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
2,4-diketo-3-deoxy-L-fuconate hydrolase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8Z9_COLFT
SCN18_25_1_16_R1_B_scaffold_4938_3
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

996..1667
DNA (672bp) protein (224aa)
ABC transporter permease n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036A1237
polar amino acid ABC transporter inner membrane subunit
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCN18_25_1_16_R1_B_scaffold_4938_4
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1669..2319
DNA (651bp) protein (217aa)
amino acid ABC transporter permease n=1 Tax=Curvibacter lanceolatus RepID=UPI000378F347
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJE49539.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_25_1_16_R1_B_scaffold_4938_5
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2360..2974
DNA (615bp) protein (205aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Acidovorax sp. CF316 RepID=J0KE84_9BURK
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJE49538.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
family 3 extracellular solute-binding protein
Displaying 5 items

View Taxonomy