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SCN18_25_1_16_R1_B_scaffold_2818

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_2818_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..378)
DNA (378bp) protein (126aa)
2-ketoglutaric semialdehyde dehydrogenase (EC:1.2.1.26)
2-ketoglutaric semialdehyde dehydrogenase {ECO:0000313|EMBL:CDM23213.1}; EC=1.2.1.26 {ECO:0000313|EMBL:CDM23213.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Succinate-semialdehyde dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XF49_VARPD
SCN18_25_1_16_R1_B_scaffold_2818_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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545..1711
DNA (1167bp) protein (389aa)
glucose sorbosone dehydrogenase n=1 Tax=Ochrobactrum anthropi RepID=UPI000287CC1B
PQQ-dependent oxidoreductase, gdhB family
PQQ-dependent oxidoreductase, gdhB family {ECO:0000313|EMBL:CDM23212.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_2818_trna_1
unknown

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comp(1778..1851)
DNA (74bp)
transferRNA Pro
SCN18_25_1_16_R1_B_scaffold_2818_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1919..2884)
DNA (966bp) protein (322aa)
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase (EC:2.5.1.90 2.5.1.29 2.5.1.1 2.5.1.10)
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase {ECO:0000313|EMBL:CDM23203.1}; EC=2.5.1.1 {ECO:0000313|EMBL:CDM23203.1};; EC=2.5.1.10 {ECO:0000313|EMBL:CDM23203.1};; EC=2.5.1.29 {ECO:0000313|EMBL:CDM23203.1};; EC=2.5.1.90 {ECO:0000313|EMBL:CDM23203.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Octaprenyl-diphosphate synthase n=6 Tax=Bordetella RepID=J7QGK9_BORP1
SCN18_25_1_16_R1_B_scaffold_2818_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2971..3849
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T163_ALCXX
putative ATP/GTP-binding protein
Putative ATP/GTP-binding protein {ECO:0000313|EMBL:CDM23202.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_2818_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3891..4781
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR63_PUSST
7,8-dihydro-8-oxoguanine-triphosphatase
7,8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:CDM23201.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying 6 items

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