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SCN18_25_1_16_R1_B_scaffold_1428

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1428_1
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..228
DNA (228bp) protein (76aa)
Adenosine kinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRX5_PUSST
Sugar kinases, ribokinase family
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CDM25977.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1428_2
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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285..782
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F0303D
Outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:CDM25976.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1428_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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792..1694
DNA (903bp) protein (301aa)
Putative transcriptional regulatory protein, LysR family n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KLX8_RHISN
LysR family transcriptional regulator
Putative transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:ACP23414.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_25_1_16_R1_B_scaffold_1428_4
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1691..2407)
DNA (717bp) protein (239aa)
Putative transferase protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXV7_BORPD
hypothetical protein
Putative transferase protein {ECO:0000313|EMBL:CAP40602.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCN18_25_1_16_R1_B_scaffold_1428_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2454..3248)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WI53_VEREI
short-chain dehydrogenase/reductase SDR
Tax=BJP_IG2103_Rhodocyclales_63_50
SCN18_25_1_16_R1_B_scaffold_1428_6
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3404..4291
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J0J4_COMT2
LysR family transcriptional regulator {ECO:0000313|EMBL:KGH13620.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
transcriptional regulator, LysR family
SCN18_25_1_16_R1_B_scaffold_1428_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4413..5405
DNA (993bp) protein (331aa)
Threonine dehydratase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P8K9_RHIML
threonine dehydratase
Putative threonine dehydratase {ECO:0000313|EMBL:ACP23415.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_25_1_16_R1_B_scaffold_1428_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5423..6490
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PM76_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEC80467.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCN18_25_1_16_R1_B_scaffold_1428_9
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria

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6502..6966
DNA (465bp) protein (155aa)
Probable transcriptional regulator n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KLY1_RHISN
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:ACP23417.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_25_1_16_R1_B_scaffold_1428_10
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7035..8081
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037EB357
TRAP transporter solute receptor, unknown substrate 7
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_25_1_16_R1_B_scaffold_1428_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8155..8808
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000382582F
TRAP dicarboxylate transporter, DctQ subunit,unknown substrate 7
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
SCN18_25_1_16_R1_B_scaffold_1428_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8805..9455
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035F6648
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Displaying 12 items

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