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SCN18_25_1_16_R1_B_scaffold_1450

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1450_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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264..830
DNA (567bp) protein (189aa)
Phosphinothricin acetyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H8C2_9BRAD
Phosphinothricin N-acetyltransferase {ECO:0000313|EMBL:EXF47314.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
phosphinothricin acetyltransferase
SCN18_25_1_16_R1_B_scaffold_1450_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(855..1508)
DNA (654bp) protein (218aa)
Multiple antibiotic resistance (MarC)-related protein n=2 Tax=Acidiphilium RepID=A5G1Y0_ACICJ
Multiple antibiotic resistance protein marC
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1450_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1582..3228)
DNA (1647bp) protein (549aa)
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:CDM23589.1}; EC=1.5.5.1 {ECO:0000313|EMBL:CDM23589.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC:1.5.5.1)
Putative electron transfer flavoprotein-ubiquinone oxidoreductase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXF5_PUSST
SCN18_25_1_16_R1_B_scaffold_1450_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3374..4033)
DNA (660bp) protein (220aa)
Putative TetR family transcriptional regulator n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GNR5_9ACTO
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDM23590.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1450_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4135..5094
DNA (960bp) protein (320aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HVK0_MYCRH
oxidoreductase, short chain dehydrogenase/reductase family protein
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDM23591.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1450_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5110..6798
DNA (1689bp) protein (563aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDM23592.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CDM23592.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7P1D3_9BACL
SCN18_25_1_16_R1_B_scaffold_1450_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6844..7290
DNA (447bp) protein (149aa)
Methylmalonyl-CoA epimerase n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L0Z4_9GAMM
methylmalonyl-CoA epimerase
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:CDM23593.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1450_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7335..8135
DNA (801bp) protein (267aa)
Putative enoyl-CoA hydratase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GNQ7_9ACTO
probable dehydrogenase
Probable dehydrogenase {ECO:0000313|EMBL:CDM23594.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1450_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8151..8939
DNA (789bp) protein (263aa)
Beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24)
Beta-ketoadipate enol-lactone hydrolase {ECO:0000313|EMBL:CDM23595.1}; EC=3.1.1.24 {ECO:0000313|EMBL:CDM23595.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Putative hydrolase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GNR3_9ACTO
SCN18_25_1_16_R1_B_scaffold_1450_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9036..9359
DNA (324bp) protein (108aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDM23596.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDM23596.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GNR1_9ACTO
Displaying 10 items

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