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SCN18_25_1_16_R1_B_scaffold_1989

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1989_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..245
DNA (243bp) protein (81aa)
Short chain dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUJ1_PUSST
Oxidoreductase, short-chain dehydrogenase/reductase family
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:CDM23357.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1989_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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255..938
DNA (684bp) protein (228aa)
Regulatory protein TetR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V409_VARPE
TetR family transcriptional regulator
Variovorax paradoxus strain MEDvA23 contig_89, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21248.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCN18_25_1_16_R1_B_scaffold_1989_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1071..1835
DNA (765bp) protein (255aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V411_VARPE
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38130.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCN18_25_1_16_R1_B_scaffold_1989_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1905..2915
DNA (1011bp) protein (337aa)
Putative sulfonate/nitrate transport system substrate-binding protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V412_VARPE
Variovorax paradoxus strain MEDvA23 contig_89, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21245.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
sulfonate/nitrate transport system substrate-binding protein
SCN18_25_1_16_R1_B_scaffold_1989_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2934..3713
DNA (780bp) protein (260aa)
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V413_VARPE
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACS18510.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_25_1_16_R1_B_scaffold_1989_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3735..5162
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C6ADD
Uncharacterized protein {ECO:0000313|EMBL:EJL76227.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1989_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5184..6353
DNA (1170bp) protein (390aa)
Putative oxidoreductase n=1 Tax=Variovorax paradoxus B4 RepID=T1X7Z4_VARPD
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AGU49057.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_25_1_16_R1_B_scaffold_1989_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6366..6635
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LJN7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL85448.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
Displaying 8 items

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