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SCN18_25_1_16_R1_B_scaffold_3813

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_3813_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..684)
DNA (684bp) protein (228aa)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC:1.2.1.60)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:CDM25714.1}; EC=1.2.1.60 {ECO:0000313|EMBL:CDM25714.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000309A4FE
SCN18_25_1_16_R1_B_scaffold_3813_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(692..1468)
DNA (777bp) protein (259aa)
5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC:4.1.1.68)
5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:CDM25715.1}; EC=4.1.1.68 {ECO:0000313|EMBL:CDM25715.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
5-carboxy-2-oxohept-3-enedioate decarboxylase HpaG2 subunit n=1 Tax=Ralstonia pickettii OR214 RepID=R0DYU0_RALPI
SCN18_25_1_16_R1_B_scaffold_3813_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1465..2133)
DNA (669bp) protein (223aa)
5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC:4.1.1.68)
5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:CDM25716.1}; EC=4.1.1.68 {ECO:0000313|EMBL:CDM25716.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037DC3DF
SCN18_25_1_16_R1_B_scaffold_3813_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2162..3487)
DNA (1326bp) protein (442aa)
TRAP-type C4-dicarboxylate transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W963_MAGSA
TRAP dicarboxylate transporter, DctM subunit
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:CDM25717.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_3813_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3484..3648)
DNA (165bp) protein (55aa)
TRAP dicarboxylate transporter, DctQ subunit
TRAP dicarboxylate transporter, DctQ subunit {ECO:0000313|EMBL:CDM25718.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying 5 items

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