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SCN18_25_1_16_R1_B_scaffold_1837_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1626..2543

Top 3 Functional Annotations

Value Algorithm Source
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase (EC:2.5.1.90 2.5.1.29 2.5.1.1 2.5.1.10) similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 305.0
  • Bit_score: 563
  • Evalue 2.50e-158
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase {ECO:0000313|EMBL:CDM24974.1}; EC=2.5.1.1 {ECO:0000313|EMBL:CDM24974.1};; EC=2.5.1.10 {ECO:0000313|EMBL:CDM24974.1};; EC=2.5.1.29 {ECO:0000313|EMBL:CDM24974.1};; EC=2.5.1.90 {ECO:0000313|EMBL:CDM24974.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 305.0
  • Bit_score: 563
  • Evalue 1.20e-157
Geranyltranstransferase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U785_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 299.0
  • Bit_score: 425
  • Evalue 2.90e-116

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGAGCGTTGCGATGGGGAATTTCGACGCCTGGCTGCGCGATCGGGTGGATCACGTCGCGGCGGTGCTCGACGAGCTGCTGCCGCCCGTCCAGGACGATGCCGCGCGCCTGCACGAGGCCATGCGCTATGCCGTCCTGGGGCCGGGCAAGCGGGTGCGGGCCGCCCTGGTCTACGCGGCCGGCGAAGCCAGCCGCGCGCCGGCCGGGACGGCCGCCGCCCAGGACCTGGCGCTGGACGCCGCCGCCGCCGCCGTGGAACTGATTCACGCCTATTCGCTGATCCATGACGACCTGCCCTGCATGGACGACGACGACCTGCGGCGCGGCCGGCCCACCGTGCACCGCCAGTTCGACGACGAGGCCCTGGCCATGCTGGCCGGGGACGCGCTGCAGCCGCTGGCCTTCGATTGCCTGGCGCAGATGCCCATCGCGCCGGCCCTGACCGTCCAGGCGGTCCAGCTGCTGGCCCGCGCGGCGGGCAGCGAGGGCATGGTCGGCGGCCAGGCCATCGACTGCGCCAGCGTCGGCCGGGCGCTGCCGATCGAGGCGCTGCAGCACATGCACCGCATGAAGACCGGCGCCCTGCTGGAAGCCAGCGTGCTGCTGGGCGGGGTGGTGGCCGGGGCCAGCAGCACGGTGCGCGCCGGCCTGGAATCCTATGCCTCGGCCATGGGCCTGGCCTTCCAGGTGGTGGACGACATCCTGGACGTGACCGCCGATTCGGCCACCCTGGGCAAGACCGCCGGCAAGGACGCCGCCCGGGGCAAGCCGACCTACGTGTCCATCATGGGACTGGACGGCTCGCGCGAACTGCTGGACGGCCTGCGCGAACAGGCCTGCGCCGCGCTGCTGCCGCTGGGGCCGTCGGCCTGCCGCCTGCGCGAGCTGGCCGACTACATCATCGGCCGGTCCCATTAG
PROTEIN sequence
Length: 306
MSVAMGNFDAWLRDRVDHVAAVLDELLPPVQDDAARLHEAMRYAVLGPGKRVRAALVYAAGEASRAPAGTAAAQDLALDAAAAAVELIHAYSLIHDDLPCMDDDDLRRGRPTVHRQFDDEALAMLAGDALQPLAFDCLAQMPIAPALTVQAVQLLARAAGSEGMVGGQAIDCASVGRALPIEALQHMHRMKTGALLEASVLLGGVVAGASSTVRAGLESYASAMGLAFQVVDDILDVTADSATLGKTAGKDAARGKPTYVSIMGLDGSRELLDGLREQACAALLPLGPSACRLRELADYIIGRSH*