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SCN18_25_1_16_R1_B_scaffold_1837

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1837_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1167)
DNA (1167bp) protein (389aa)
Iron-sulfur protein n=36 Tax=Bordetella RepID=M5P2T9_9BORD
Iron-sulfur protein in siderophore [Alcaligin] cluster
Iron-sulfur protein in siderophore [Alcaligin] cluster {ECO:0000313|EMBL:CDM24976.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1837_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1342..1629
DNA (288bp) protein (96aa)
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Achromobacter piechaudii HLE RepID=J4J7I3_9BURK
SCN18_25_1_16_R1_B_scaffold_1837_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1626..2543
DNA (918bp) protein (306aa)
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase (EC:2.5.1.90 2.5.1.29 2.5.1.1 2.5.1.10)
Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase {ECO:0000313|EMBL:CDM24974.1}; EC=2.5.1.1 {ECO:0000313|EMBL:CDM24974.1};; EC=2.5.1.10 {ECO:0000313|EMBL:CDM24974.1};; EC=2.5.1.29 {ECO:0000313|EMBL:CDM24974.1};; EC=2.5.1.90 {ECO:0000313|EMBL:CDM24974.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Geranyltranstransferase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U785_9BURK
SCN18_25_1_16_R1_B_scaffold_1837_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2552..4411
DNA (1860bp) protein (620aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
1-deoxy-D-xylulose 5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T438_BORBO
SCN18_25_1_16_R1_B_scaffold_1837_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4408..5220
DNA (813bp) protein (271aa)
GTP cyclohydrolase I type 2 (EC:3.5.4.16)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527, ECO:0000313|EMBL:CDM24972.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
GTP cyclohydrolase FolE2 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GM99_PUSST
SCN18_25_1_16_R1_B_scaffold_1837_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5432..5803
DNA (372bp) protein (124aa)
30S ribosomal protein S6 n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F5BF18
SSU ribosomal protein S6p
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1837_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5823..6116
DNA (294bp) protein (98aa)
Primosomal replication protein N n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F933_9BURK
Primosomal replication protein N
Primosomal replication protein n {ECO:0000256|SAAS:SAAS00194886}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1837_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6117..6434
DNA (318bp) protein (106aa)
30S ribosomal protein S18 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMA2_PUSST
SSU ribosomal protein S18p / SSU ribosomal protein S18p, zinc-independent
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1837_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6451..6906
DNA (456bp) protein (152aa)
50S ribosomal protein L9 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMA3_PUSST
LSU ribosomal protein L9p
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1837_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7035..7163
DNA (129bp) protein (43aa)
Replicative DNA helicase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T457_ALCXX
Replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:CDM24967.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying 10 items

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