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SCN18_25_1_16_R1_B_scaffold_215

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_215_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..281
DNA (279bp) protein (93aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ006.;"
tRNA pseudouridine synthase B n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JDX3_BURVG
trNA pseudouridine synthase B
SCN18_25_1_16_R1_B_scaffold_215_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

278..2155
DNA (1878bp) protein (626aa)
GTP-binding protein TypA n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RX18_9BURK
GTP-binding protein TypA {ECO:0000313|EMBL:EFV95009.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
GTP-binding protein TypA
SCN18_25_1_16_R1_B_scaffold_215_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2350..2805
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000307886C
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
SCN18_25_1_16_R1_B_scaffold_215_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2941..3558
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLX3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93001.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_215_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3594..4496)
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR-family protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2ECI1_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:KJK18693.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
lysR; transcriptional regulator, LysR-family
SCN18_25_1_16_R1_B_scaffold_215_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4610..6211
DNA (1602bp) protein (534aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
aceB; malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IN47_9BURK
SCN18_25_1_16_R1_B_scaffold_215_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6258..7019)
DNA (762bp) protein (254aa)
ABC-2 type transporter n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TF12_BURSG
ABC-2 type transporter family protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCN18_25_1_16_R1_B_scaffold_215_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7016..8041)
DNA (1026bp) protein (342aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003689FA8
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG17398.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
SCN18_25_1_16_R1_B_scaffold_215_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8045..8752
DNA (708bp) protein (236aa)
putative 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFU8_9BACT
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_25_1_16_R1_B_scaffold_215_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8749..9654
DNA (906bp) protein (302aa)
Putative uncharacterized protein id=4035242 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SCN18_25_1_16_R1_B_scaffold_215_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9740..11275
DNA (1536bp) protein (512aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCF4_GEOUR
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ24740.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
SCN18_25_1_16_R1_B_scaffold_215_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11289..12464
DNA (1176bp) protein (392aa)
RND family efflux transporter MFP subunit n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0E191_9BURK
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AFT90552.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
SCN18_25_1_16_R1_B_scaffold_215_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..15591
DNA (3111bp) protein (1037aa)
acriflavine resistance protein B n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI0003694E44
acrB/AcrD/AcrF family protein
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:AJZ63254.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCN18_25_1_16_R1_B_scaffold_215_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15588..16202
DNA (615bp) protein (205aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AG6_POLSJ
methylated-DNA--protein-cysteine methyltransferase
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ABE44476.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCN18_25_1_16_R1_B_scaffold_215_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16281..19208)
DNA (2928bp) protein (976aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
Aconitase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGB3_NITHX
aconitate hydratase 1
SCN18_25_1_16_R1_B_scaffold_215_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19252..20292)
DNA (1041bp) protein (347aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037BD16F
SCN18_25_1_16_R1_B_scaffold_215_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20387..21412
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DDH2_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:KGF70996.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
patatin
SCN18_25_1_16_R1_B_scaffold_215_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21409..21822
DNA (414bp) protein (138aa)
Putative peptide chain release factor n=1 Tax=mine drainage metagenome RepID=E6PMS2_9ZZZZ
Putative peptide chain release factor {ECO:0000313|EMBL:CBH96224.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
class I peptide chain release factor
SCN18_25_1_16_R1_B_scaffold_215_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21868..22125
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPM1_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94958.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCN18_25_1_16_R1_B_scaffold_215_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22261..23067)
DNA (807bp) protein (269aa)
SCN18_25_1_16_R1_B_scaffold_215_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23517..24683)
DNA (1167bp) protein (389aa)
Putative aminotransferase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=I6AMW3_BURTH
Aminotransferase class-V family protein {ECO:0000313|EMBL:KGS03024.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
aminotransferase class-V family protein
SCN18_25_1_16_R1_B_scaffold_215_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24731..25261)
DNA (531bp) protein (177aa)
coxB; cytochrome c oxidase, subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
Cytochrome c oxidase subunit 2 n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39CP6_BURS3
SCN18_25_1_16_R1_B_scaffold_215_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25320..26144)
DNA (825bp) protein (275aa)
Transcriptional regulator, IclR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLJ6_9PROT
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EDP66086.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
IclR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_215_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26205..26948)
DNA (744bp) protein (248aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R4K8_9RHIZ
Short-chain dehydrogenase {ECO:0000313|EMBL:KER67902.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
short-chain dehydrogenase
SCN18_25_1_16_R1_B_scaffold_215_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26945..27703)
DNA (759bp) protein (253aa)
Arylmalonate decarboxylase id=2902199 bin=GWC2_Methylomirabilis_70_16 species=Pyrococcus yayanosii genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
decarboxylase
Tax=RBG_13_Deltaproteobacteria_51_10_curated
SCN18_25_1_16_R1_B_scaffold_215_26
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27706..28434)
DNA (729bp) protein (243aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=2902204 bin=GWC2_Methylomirabilis_70_16 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_25_1_16_R1_B_scaffold_215_27
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28445..30292)
DNA (1848bp) protein (616aa)
Putative branched-chain amino acid ABC transporter, permease protein id=2902208 bin=GWC2_Methylomirabilis_70_16 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter-like protein
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_25_1_16_R1_B_scaffold_215_28
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30289..31164)
DNA (876bp) protein (292aa)
Putative branched-chain amino acid transport system permease protein id=2902215 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid transport system permease
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_25_1_16_R1_B_scaffold_215_29
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31176..32462)
DNA (1287bp) protein (429aa)
Uncharacterized protein id=2902222 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_25_1_16_R1_B_scaffold_215_30
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32482..34197)
DNA (1716bp) protein (572aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIU9_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KGJ69189.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
putative FAD-binding dehydrogenase
Displaying items 1-30 of 63 in total

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