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SCN18_25_1_16_R1_B_scaffold_395

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_395_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..272
DNA (270bp) protein (90aa)
ABC transporter related protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VT67_POLNA
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABM38845.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCN18_25_1_16_R1_B_scaffold_395_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272..1480
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VT68_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM38846.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCN18_25_1_16_R1_B_scaffold_395_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1565..2956)
DNA (1392bp) protein (464aa)
Putative transporter, MFS-type n=1 Tax=Variovorax paradoxus B4 RepID=T1X5H5_VARPD
Major facilitator family transporter {ECO:0000313|EMBL:CDS53035.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
putative transporter, MFS-type
SCN18_25_1_16_R1_B_scaffold_395_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3080..3388
DNA (309bp) protein (103aa)
SCN18_25_1_16_R1_B_scaffold_395_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3385..3783
DNA (399bp) protein (133aa)
Tax=RBG_16_Planctomycetes_59_8_curated
SCN18_25_1_16_R1_B_scaffold_395_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3862..4206)
DNA (345bp) protein (115aa)
Arsenical resistance operon trans-acting repressor ArsD n=1 Tax=Thauera phenylacetica B4P RepID=N6YUP9_9RHOO
Arsenical resistance operon trans-acting repressor ArsD {ECO:0000313|EMBL:ENO97986.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
Arsenical resistance operon trans-acting repressor ArsD
SCN18_25_1_16_R1_B_scaffold_395_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4449..5264
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKW4_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73707.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_395_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5473..5760
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZIM4_ANACC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCN18_25_1_16_R1_B_scaffold_395_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5763..6116
DNA (354bp) protein (118aa)
Regulatory protein MarR n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZKF9_ANACC
regulatory protein MarR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCN18_25_1_16_R1_B_scaffold_395_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6302..6727
DNA (426bp) protein (142aa)
Mono-heme class I cytochrome c n=1 Tax=Acidovorax sp. KKS102 RepID=K0HRN9_9BURK
mono-heme class I cytochrome c
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCN18_25_1_16_R1_B_scaffold_395_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6755..7273
DNA (519bp) protein (173aa)
cytochrome C n=1 Tax=Acidovorax radicis RepID=UPI0002375ED4
diheme cytochrome c
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCN18_25_1_16_R1_B_scaffold_395_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7296..7964
DNA (669bp) protein (223aa)
Cytochrome B561 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I998_9BURK
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:AFU45606.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCN18_25_1_16_R1_B_scaffold_395_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8013..8876)
DNA (864bp) protein (288aa)
type 11 methyltransferase id=5083351 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
UbiE/COQ5 methyltransferase
Tax=GWE1_Burkholderiales_65_30_curated
SCN18_25_1_16_R1_B_scaffold_395_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8995..9888
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family id=1287129 bin=GWE1_Burkholderiales_65_30 species=Mesorhizobium sp. STM 4661 genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
transcriptional regulator, LysR family
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCN18_25_1_16_R1_B_scaffold_395_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9940..10653)
DNA (714bp) protein (238aa)
Glutathione S-transferase domain protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z334_9NEIS
Glutathione S-transferase domain protein {ECO:0000313|EMBL:EEG08987.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
glutathione S-transferase domain-containing protein
SCN18_25_1_16_R1_B_scaffold_395_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10795..11079
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W146_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
SCN18_25_1_16_R1_B_scaffold_395_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11082..11378
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Serratia fonticola AU-AP2C RepID=U2N616_SERFO
plasmid stabilization system
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
SCN18_25_1_16_R1_B_scaffold_395_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11420..13096)
DNA (1677bp) protein (559aa)
Thioredoxin reductase {ECO:0000313|EMBL:ETY79499.1}; EC=1.8.1.9 {ECO:0000313|EMBL:ETY79499.1};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
Thioredoxin reductase n=1 Tax=Burkholderia sp. BT03 RepID=J3BDE9_9BURK
cyclic nucleotide-binding protein
SCN18_25_1_16_R1_B_scaffold_395_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13189..14046
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125M8_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE45764.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCN18_25_1_16_R1_B_scaffold_395_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14114..15208
DNA (1095bp) protein (365aa)
6-pyruvoyl-tetrahydropterin synthase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H0S8_9GAMM
6-pyruvoyl-tetrahydropterin synthase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
SCN18_25_1_16_R1_B_scaffold_395_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15225..15863
DNA (639bp) protein (213aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUY6_9PROT
radical SAM domain-containing protein
SCN18_25_1_16_R1_B_scaffold_395_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15882..17843)
DNA (1962bp) protein (654aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZK0_VARPE
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADU37808.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCN18_25_1_16_R1_B_scaffold_395_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17847..19097)
DNA (1251bp) protein (417aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZJ9_VARPE
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADU37807.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCN18_25_1_16_R1_B_scaffold_395_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19173..19835
DNA (663bp) protein (221aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:EGV17878.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EGV17878.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
DNA-directed DNA polymerase n=1 Tax=Thiocapsa marina 5811 RepID=F9UDD4_9GAMM
DNA polymerase III subunit epsilon
SCN18_25_1_16_R1_B_scaffold_395_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19843..20124)
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_25_1_16_R1_B_scaffold_395_26
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20277..20666)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003766ED2
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:EJL82918.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_395_27
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20709..21497)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A7BD4
molybdenum cofactor biosynthesis F family protein
Molybdenum cofactor biosynthesis F family protein {ECO:0000313|EMBL:AIO65547.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
SCN18_25_1_16_R1_B_scaffold_395_28
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21521..22423)
DNA (903bp) protein (301aa)
3-oxoacyl-ACP reductase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A7BD5
short chain dehydrogenase family protein
Short chain dehydrogenase family protein {ECO:0000313|EMBL:AIO67087.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
SCN18_25_1_16_R1_B_scaffold_395_29
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22577..24079
DNA (1503bp) protein (501aa)
aldehyde dehydrogenase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A85EB
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:KGR99304.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
phenylacetaldehyde dehydrogenase
SCN18_25_1_16_R1_B_scaffold_395_30
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24083..25726
DNA (1644bp) protein (548aa)
GMC oxidoreductase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=I6AJQ4_BURTH
FAD dependent oxidoreductase family protein
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:AJY44220.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2002721687.;"
Displaying items 1-30 of 49 in total

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