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SCN18_25_1_16_R1_B_scaffold_462

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_462_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1492)
DNA (1491bp) protein (497aa)
ABC transporter-related protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y357_LEPCP
ABC transporter-like protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCN18_25_1_16_R1_B_scaffold_462_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1495..2532)
DNA (1038bp) protein (346aa)
Inner-membrane translocator n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y358_LEPCP
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACB33261.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
SCN18_25_1_16_R1_B_scaffold_462_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2537..3673)
DNA (1137bp) protein (379aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222M7_RHOFD
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
SCN18_25_1_16_R1_B_scaffold_462_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3717..5564)
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003607937
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EHR72728.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
feruloyl-CoA synthase
SCN18_25_1_16_R1_B_scaffold_462_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5561..6370)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036E1A95
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EHR72729.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
enoyl-CoA hydratase
SCN18_25_1_16_R1_B_scaffold_462_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6567..7436
DNA (870bp) protein (290aa)
amidohydrolase n=1 Tax=Caldimonas manganoxidans RepID=UPI000361ACFD
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
SCN18_25_1_16_R1_B_scaffold_462_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7529..7825
DNA (297bp) protein (99aa)
Acylphosphatase n=1 Tax=Variovorax sp. CF313 RepID=J2KJ74_9BURK
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acylphosphatase
SCN18_25_1_16_R1_B_scaffold_462_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7880..8827)
DNA (948bp) protein (316aa)
Sodium Bile acid symporter family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4X7_POLGS
Sodium Bile acid symporter family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
SCN18_25_1_16_R1_B_scaffold_462_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8855..9280)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI18_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWS59641.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
SCN18_25_1_16_R1_B_scaffold_462_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9475..10512
DNA (1038bp) protein (346aa)
Conserved hypothetical dioxygenase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKW1_METPP
dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCN18_25_1_16_R1_B_scaffold_462_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10532..11350
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A939_COLFT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK62145.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
SCN18_25_1_16_R1_B_scaffold_462_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11472..11705
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZA57_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14085.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_462_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11737..12165
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00037B105A
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:CDM66097.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
OsmC subfamily peroxiredoxin
SCN18_25_1_16_R1_B_scaffold_462_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12251..12892
DNA (642bp) protein (214aa)
NAD-dependent epimerase/dehydratase n=2 Tax=Ralstonia pickettii RepID=B2UB67_RALPJ
NAD-dependent epimerase/dehydratase
Tax=GWC2_Nitrospirae_57_9_curated
SCN18_25_1_16_R1_B_scaffold_462_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13026..13688)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMC6_AZOBR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCN18_25_1_16_R1_B_scaffold_462_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13735..14316)
DNA (582bp) protein (194aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
GTP cyclohydrolase I n=2 Tax=Pandoraea RepID=V5UB96_9BURK
GTP cyclohydrolase
SCN18_25_1_16_R1_B_scaffold_462_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14387..15037
DNA (651bp) protein (217aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J3D6A3_9BURK
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_462_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15059..15826)
DNA (768bp) protein (256aa)
ATP-binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTR0_TISMK
ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_25_1_16_R1_B_scaffold_462_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15823..16593)
DNA (771bp) protein (257aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CIL1_9BRAD
ABC transporter permease
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_25_1_16_R1_B_scaffold_462_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16590..17654)
DNA (1065bp) protein (355aa)
Dihydrodipicolinate synthase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTR1_TISMK
dapA; Dihydrodipicolinate synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_462_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17784..18776
DNA (993bp) protein (331aa)
Pyrimidine biosynthesis enzyme n=1 Tax=Nitratireductor indicus C115 RepID=K2PHZ7_9RHIZ
Pyrimidine precursor biosynthesis enzyme
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_25_1_16_R1_B_scaffold_462_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18855..19550)
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Burkholderia cenocepacia RepID=A0B3X7_BURCH
Uncharacterized protein {ECO:0000313|EMBL:KGB91956.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_462_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19535..20023)
DNA (489bp) protein (163aa)
Putative Transcriptional regulator, XRE family id=4831426 bin=GWA2_Polynucleobacter_45_21 species=Candidatus Glomeribacter gigasporarum genus=Candidatus Glomeribacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Polynucleobacter_45_21_curated
SCN18_25_1_16_R1_B_scaffold_462_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20131..21036)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037936F0
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_25_1_16_R1_B_scaffold_462_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21023..22063)
DNA (1041bp) protein (347aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YR60_9RHIZ
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_25_1_16_R1_B_scaffold_462_26
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22137..23150)
DNA (1014bp) protein (338aa)
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase vitamin-B12 independent n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4L7_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_25_1_16_R1_B_scaffold_462_27
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23317..24468
DNA (1152bp) protein (384aa)
Oxidoreductase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PNW3_9BURK
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AHB04937.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCN18_25_1_16_R1_B_scaffold_462_28
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24482..25660
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003674368
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_25_1_16_R1_B_scaffold_462_29
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25657..26625
DNA (969bp) protein (323aa)
Endonuclease n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PNR2_9BURK
endonuclease
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_25_1_16_R1_B_scaffold_462_30
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26692..27549
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037FB0B3
AraC family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Displaying items 1-30 of 39 in total

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