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SCN18_25_1_16_R1_B_scaffold_497

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_497_1
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(2..457)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037D6ACF
methylmalonyl-CoA mutase family protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCN18_25_1_16_R1_B_scaffold_497_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(491..1960)
DNA (1470bp) protein (490aa)
Predicted protein n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZX03_9ACTO
Predicted protein {ECO:0000313|EMBL:EFE65113.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
purine-cytosine permease-like transporter
SCN18_25_1_16_R1_B_scaffold_497_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1957..3675)
DNA (1719bp) protein (573aa)
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KBU6_9FIRM
N-methylhydantoinase B/acetone carboxylase, alpha subunit
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCN18_25_1_16_R1_B_scaffold_497_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3672..5771)
DNA (2100bp) protein (700aa)
N-methylhydantoinase A/acetone carboxylase, beta subunit n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KG70_9FIRM
N-methylhydantoinase A/acetone carboxylase, beta subunit
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCN18_25_1_16_R1_B_scaffold_497_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6103..6678
DNA (576bp) protein (192aa)
Putative transcriptional regulator n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5S7_ALKEH
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABI57810.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
SCN18_25_1_16_R1_B_scaffold_497_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6717..7460)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036DA16E
Uncharacterized protein {ECO:0000313|EMBL:EKS39782.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Branched-chain amino acid transport ATP-binding protein LivF
SCN18_25_1_16_R1_B_scaffold_497_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7441..8196)
DNA (756bp) protein (252aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EHP7_9GAMM
ABC transporter
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCN18_25_1_16_R1_B_scaffold_497_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..9147)
DNA (948bp) protein (316aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NXG8_AZOS1
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJR65689.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
livM; branched-chain amino acid transport system permease
SCN18_25_1_16_R1_B_scaffold_497_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9140..10015)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGB4_9BRAD
ABC transporter permease {ECO:0000313|EMBL:KFG66998.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
inner-membrane translocator
SCN18_25_1_16_R1_B_scaffold_497_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10047..11222)
DNA (1176bp) protein (392aa)
Extracellular ligand-binding receptor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDQ1_XANP2
putative ABC-type branched-chain amino acid transport systems, periplasmic component
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_497_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11496..12110
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036B1AA9
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABI57810.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
SCN18_25_1_16_R1_B_scaffold_497_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12107..13642)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037B5C84
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AGL00665.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
SCN18_25_1_16_R1_B_scaffold_497_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13657..14058)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036D4A15
methylmalonyl-CoA mutase family protein
Methylmalonyl-CoA mutase family protein {ECO:0000313|EMBL:AGL00664.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
SCN18_25_1_16_R1_B_scaffold_497_14
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(14071..15717)
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037D6ACF
methylmalonyl-CoA mutase family protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCN18_25_1_16_R1_B_scaffold_497_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16067..16285
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2R6_LEPCP
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAP89825.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
SCN18_25_1_16_R1_B_scaffold_497_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16358..17059)
DNA (702bp) protein (234aa)
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XLU7_ALCXX
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIR49714.1}; ABC transporter like protein {ECO:0000313|EMBL:EFV84840.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
SCN18_25_1_16_R1_B_scaffold_497_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17059..17808)
DNA (750bp) protein (250aa)
ABC transporter (EC:3.6.3.-)
ABC transporter family protein 90 {ECO:0000313|EMBL:ADP19197.1}; EC=3.6.3.- {ECO:0000313|EMBL:ADP19197.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
ABC transporter family protein 90 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJG5_ACHXA
SCN18_25_1_16_R1_B_scaffold_497_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17801..18769)
DNA (969bp) protein (323aa)
Inner-membrane translocator 58 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJG4_ACHXA
ABC transporter permease {ECO:0000313|EMBL:KGY27237.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
inner-membrane translocator
SCN18_25_1_16_R1_B_scaffold_497_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18777..19688)
DNA (912bp) protein (304aa)
ABC transporter permease n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037BC22D
inner-membrane translocator
Inner-membrane translocator 57 {ECO:0000313|EMBL:ADP19195.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCN18_25_1_16_R1_B_scaffold_497_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19719..20888)
DNA (1170bp) protein (390aa)
Extracellular ligand-binding receptor n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E5U8B1_ALCXX
ABC transporter substrate-binding protein
Putative ABC transporter subunit {ECO:0000313|EMBL:CCH05615.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
SCN18_25_1_16_R1_B_scaffold_497_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20930..22609)
DNA (1680bp) protein (560aa)
AMP-dependent synthetase and ligase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZMI4_9PROT
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCN18_25_1_16_R1_B_scaffold_497_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22630..24087)
DNA (1458bp) protein (486aa)
NADH:flavin oxidoreductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z4I3_9PROT
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EME69275.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
NADH:flavin oxidoreductase
SCN18_25_1_16_R1_B_scaffold_497_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24199..25818)
DNA (1620bp) protein (540aa)
Crotonobetaine/carnitine-CoA ligase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1ZP20_9BURK
Crotonobetaine/carnitine-CoA ligase {ECO:0000313|EMBL:ERI32811.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
AMP-binding enzyme family protein
SCN18_25_1_16_R1_B_scaffold_497_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25819..26616)
DNA (798bp) protein (266aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003731DF9
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AGW91160.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCN18_25_1_16_R1_B_scaffold_497_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26758..27237)
DNA (480bp) protein (160aa)
Transcriptional regulator, MarR family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRE1_9PROT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFH10123.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
marR family protein
SCN18_25_1_16_R1_B_scaffold_497_26
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27355..28557)
DNA (1203bp) protein (401aa)
Amidohydrolase n=1 Tax=Thauera phenylacetica B4P RepID=N6YV28_9RHOO
amidohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCN18_25_1_16_R1_B_scaffold_497_27
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28563..29444)
DNA (882bp) protein (294aa)
Dihydropteroate synthase DHPS n=1 Tax=Thauera phenylacetica B4P RepID=N6ZUH0_9RHOO
dihydropteroate synthase DHPS
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_25_1_16_R1_B_scaffold_497_28
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29441..31267)
DNA (1827bp) protein (609aa)
Ferredoxin (Fragment) n=1 Tax=Thauera phenylacetica B4P RepID=N6Y8Z4_9RHOO
ferredoxin
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCN18_25_1_16_R1_B_scaffold_497_29
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31279..31992)
DNA (714bp) protein (238aa)
Vitamin B12 dependent methionine synthase activation protein
Vitamin B12 dependent methionine synthase id=2272801 bin=GWB2_Chloroflexi_54_36 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_25_1_16_R1_B_scaffold_497_30
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32021..32431)
DNA (411bp) protein (137aa)
Cobalamin B12-binding domain-containing protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZTZ7_9RHOO
B12 binding domain/Pterin binding enzyme
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Displaying 30 items

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