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SCN18_25_1_16_R1_B_scaffold_637

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_637_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(31..1116)
DNA (1086bp) protein (362aa)
cation diffusion facilitator family transporter id=12495454 bin=THIO_HI species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACR01327.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
SCN18_25_1_16_R1_B_scaffold_637_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1125..1463)
DNA (339bp) protein (113aa)
hypothetical protein id=12495453 bin=THIO_HI species=Ideonella sp. B508-1 genus=Ideonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:ENO97989.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_637_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1480..2121)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHJ5_9GAMM
hypothetical protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCN18_25_1_16_R1_B_scaffold_637_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3034..3924
DNA (891bp) protein (297aa)
PaaX domain protein, C-domain n=2 Tax=Pseudomonas aeruginosa RepID=A6UZR6_PSEA7
PaaX domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KFF36348.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA01.;"
SCN18_25_1_16_R1_B_scaffold_637_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3921..5603
DNA (1683bp) protein (561aa)
Acyl-CoA dehydrogenase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221M8_RHOFD
acyl-CoA dehydrogenase-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCN18_25_1_16_R1_B_scaffold_637_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5676..8273)
DNA (2598bp) protein (866aa)
Cyanophycin synthase (EC:6.3.2.29 6.3.2.30)
Cyanophycin synthetase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HIH4_9BURK
Cyanophycin synthetase {ECO:0000313|EMBL:ESJ02415.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
SCN18_25_1_16_R1_B_scaffold_637_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8352..10571)
DNA (2220bp) protein (740aa)
cyanophycin synthetase (EC:6.3.2.-)
Cyanophycin synthetase {ECO:0000313|EMBL:CAQ68734.1}; EC=6.3.2.- {ECO:0000313|EMBL:CAQ68734.1};; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
Cyanophycin synthetase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R354_CUPTR
SCN18_25_1_16_R1_B_scaffold_637_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10706..13105
DNA (2400bp) protein (800aa)
ABC transporter n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2H9S8_9BURK
ABC transporter {ECO:0000313|EMBL:ESJ02417.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
ABC transporter transmembrane region:ABC transporter related
SCN18_25_1_16_R1_B_scaffold_637_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13102..13587
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L345_BORA1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ48843.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
SCN18_25_1_16_R1_B_scaffold_637_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13636..14292)
DNA (657bp) protein (219aa)
gph2; phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Phosphoglycolate phosphatase Gph n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0EY76_CUPNN
SCN18_25_1_16_R1_B_scaffold_637_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14297..15022)
DNA (726bp) protein (242aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] id=5080087 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCN18_25_1_16_R1_B_scaffold_637_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15139..15810)
DNA (672bp) protein (224aa)
membrane protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036FE41E
Membrane protein {ECO:0000313|EMBL:KIF82898.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
OmpA/MotB protein
SCN18_25_1_16_R1_B_scaffold_637_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15874..17385)
DNA (1512bp) protein (504aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHV6_AZOSU
5-methylthioadenosine/S-adenosylhomocysteine deaminase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_25_1_16_R1_B_scaffold_637_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17466..20054
DNA (2589bp) protein (863aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
DNA gyrase subunit A n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI000302FF19
DNA gyrase subunit A
SCN18_25_1_16_R1_B_scaffold_637_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20193..20804)
DNA (612bp) protein (204aa)
SCN18_25_1_16_R1_B_scaffold_637_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21024..22136
DNA (1113bp) protein (371aa)
pheA; prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:AEK63578.1}; EC=4.2.1.51 {ECO:0000313|EMBL:AEK63578.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Prephenate dehydratase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ADN6_COLFT
SCN18_25_1_16_R1_B_scaffold_637_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22286..23401
DNA (1116bp) protein (372aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
Biosynthetic Aromatic amino acid aminotransferase beta (EC:2.6.1.57)
Histidinol-phosphate aminotransferase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GCZ5_9BURK
SCN18_25_1_16_R1_B_scaffold_637_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23412..24272
DNA (861bp) protein (287aa)
Prephenate dehydrogenase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X6B2_9BURK
Prephenate dehydrogenase {ECO:0000313|EMBL:KHQ94992.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
prephenate dehydrogenase
SCN18_25_1_16_R1_B_scaffold_637_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24289..24414)
DNA (126bp) protein (42aa)
transposase IS110 n=1 Tax=Ideonella sp. B508-1 RepID=UPI000349B89E
Transposase {ECO:0000313|EMBL:EWS57230.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
ISBcen8-like transposase, IS110 family
Displaying 19 items

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