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SCN18_25_1_16_R1_B_scaffold_699

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_699_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..169)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D5777A
Uncharacterized protein {ECO:0000313|EMBL:KJL22776.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_699_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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171..2444
DNA (2274bp) protein (758aa)
RNA polymerase sigma factor RpoD n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXV3_9BURK
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
rpoD; RNA polymerase sigma factor RpoD
SCN18_25_1_16_R1_B_scaffold_699_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2499..3251
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000374F2BA
integral membrane protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
SCN18_25_1_16_R1_B_scaffold_699_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3248..3460
DNA (213bp) protein (71aa)
hypothetical protein
Uncharacterized protein id=1269118 bin=GWE1_Burkholderiales_65_30 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCN18_25_1_16_R1_B_scaffold_699_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3457..4401
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000380452C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_25_1_16_R1_B_scaffold_699_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4478..5464)
DNA (987bp) protein (329aa)
MFS transporter n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003710287
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_25_1_16_R1_B_scaffold_699_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5527..6930)
DNA (1404bp) protein (468aa)
Glucose-inhibited division protein A id=3931052 bin=GWC2_Syntrophus__56_31 species=Nitratireductor pacificus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
glucose-inhibited division protein A
Tax=GWC2_Syntrophus_56_31_curated
SCN18_25_1_16_R1_B_scaffold_699_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7101..7904
DNA (804bp) protein (268aa)
Putative IclR-family regulatory protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWG6_AROAE
iclR; IclR family regulatory protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_25_1_16_R1_B_scaffold_699_trna_1
unknown

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7958..8032
DNA (75bp)
transferRNA Met
SCN18_25_1_16_R1_B_scaffold_699_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8050..9204)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLF4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR23142.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_699_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9366..10340)
DNA (975bp) protein (325aa)
Uncharacterized protein upf0065 n=2 Tax=Bordetella bronchiseptica RepID=K4T889_BORBO
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KDD64722.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_699_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10468..11037)
DNA (570bp) protein (190aa)
Oxidoreductase n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HQT1_PSEST
nitroreductase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCN18_25_1_16_R1_B_scaffold_699_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11056..11373)
DNA (318bp) protein (106aa)
id=3780581 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_25_1_16_R1_B_scaffold_699_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11561..12487
DNA (927bp) protein (309aa)
Cys regulon transcriptional activator CysB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK41_9PROT
transcriptional regulator CysB-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_699_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12420..12992)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000382E54C
transcriptional regulator, MarR family
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_699_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13043..13792
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000364764C
catalytic domain of components of various dehydrogenase complexes
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_699_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13809..14048
DNA (240bp) protein (80aa)
dihydrolipoamide succinyltransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037EFF80
sucB_odhB; 2-oxoglutarate dehydrogenase E2 component
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_699_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14061..15014
DNA (954bp) protein (318aa)
pyruvate dehydrogenase (EC:1.2.4.1)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030221E4
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_699_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15016..15990
DNA (975bp) protein (325aa)
pyruvate dehydrogenase (EC:1.2.4.1)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030E1922
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_699_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16006..16776
DNA (771bp) protein (257aa)
Short-chain dehydrogenase reductase sdr n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKF9_9BURK
short-chain dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCN18_25_1_16_R1_B_scaffold_699_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16798..17787
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKG0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89700.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
extracellular solute-binding protein, family 7 family protein 4
SCN18_25_1_16_R1_B_scaffold_699_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17830..18288
DNA (459bp) protein (153aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKG1_9BURK
C4-dicarboxylate transporter, DctQ subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
SCN18_25_1_16_R1_B_scaffold_699_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18288..19595
DNA (1308bp) protein (436aa)
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKG2_9BURK
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein {ECO:0000313|EMBL:EIK89702.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP-type C4-dicarboxylate transport system, large permease component
SCN18_25_1_16_R1_B_scaffold_699_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19727..20782
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NU60_CHRVO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ60511.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
SCN18_25_1_16_R1_B_scaffold_699_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20810..21400)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HML4_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94251.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying 25 items

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