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SCN18_25_1_16_R1_B_scaffold_1083

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1083_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..127
DNA (126bp) protein (42aa)
transposase IS110 n=1 Tax=Ideonella sp. B508-1 RepID=UPI000349B89E
Transposase {ECO:0000313|EMBL:EWS57230.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
ISBcen8-like transposase, IS110 family
SCN18_25_1_16_R1_B_scaffold_1083_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(115..327)
DNA (213bp) protein (71aa)
SCN18_25_1_16_R1_B_scaffold_1083_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(327..1451)
DNA (1125bp) protein (375aa)
hypothetical protein id=12497085 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06324.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCN18_25_1_16_R1_B_scaffold_1083_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1700..2278
DNA (579bp) protein (193aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HR16_9BURK
transglycosylase SLT domain protein
Transglycosylase SLT domain protein {ECO:0000313|EMBL:CDG82345.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
SCN18_25_1_16_R1_B_scaffold_1083_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2327..2623
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00036AEEE7
Uncharacterized protein {ECO:0000313|EMBL:EXI89961.1}; Flags: Precursor;; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1083_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2636..2926
DNA (291bp) protein (97aa)
protein TraL; K12068 conjugal transfer pilus assembly protein TraL id=12497080 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_25_1_16_R1_B_scaffold_1083_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2923..3546
DNA (624bp) protein (208aa)
Type IV conjugative transfer system protein TraE n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBT9_ACIDE
plasmid-like conjugative transfer protein TraE
Plasmid-like conjugative transfer protein TraE {ECO:0000313|EMBL:BAO29697.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
SCN18_25_1_16_R1_B_scaffold_1083_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3596..4207
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYG4_AROAE
Type-F conjugative transfer system secretin TraK {ECO:0000313|EMBL:EXI82532.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1083_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4200..5603
DNA (1404bp) protein (468aa)
TraB pilus assembly family protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APA4_DELSC
Conjugal transfer pilus assembly protein TraB {ECO:0000313|EMBL:EXI89965.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
TraB pilus assembly
SCN18_25_1_16_R1_B_scaffold_1083_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5590..6420
DNA (831bp) protein (277aa)
Protein-disulfide isomerase n=4 Tax=Burkholderiales RepID=A1WDF6_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48002.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCN18_25_1_16_R1_B_scaffold_1083_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6417..7007
DNA (591bp) protein (197aa)
Type IV conjugative transfer system protein TraV n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9V4_ALIDK
type IV conjugative transfer system protein TraV
Type IV conjugative transfer system protein TraV {ECO:0000313|EMBL:AEB85686.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_1_16_R1_B_scaffold_1083_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7011..9578
DNA (2568bp) protein (856aa)
Type-IV secretion system protein TraC n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9V4_ACIDE
Conjugal transfer ATP-binding protein TraC {ECO:0000313|EMBL:EXI89968.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
type-IV secretion system protein TraC
SCN18_25_1_16_R1_B_scaffold_1083_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9575..9940
DNA (366bp) protein (122aa)
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1083_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9958..10512
DNA (555bp) protein (185aa)
type IV secretory pathway protease TraF-like protein; K12062 conjugal transfer pilin signal peptidase TrbI id=12497072 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Signal peptidase I {ECO:0000313|EMBL:EXI84464.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1083_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10499..11164
DNA (666bp) protein (222aa)
Type-F conjugative transfer system protein TraW n=1 Tax=Thauera phenylacetica B4P RepID=N6YXM1_9RHOO
Type-F conjugative transfer system protein TraW {ECO:0000313|EMBL:ENO99016.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
type-F conjugative transfer system protein TraW
SCN18_25_1_16_R1_B_scaffold_1083_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11151..12194
DNA (1044bp) protein (348aa)
TraU family protein n=4 Tax=Burkholderiales RepID=A1WDF0_ACISJ
TraU family protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61012.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCN18_25_1_16_R1_B_scaffold_1083_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12178..12744
DNA (567bp) protein (189aa)
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AP95_DELSC
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:KIN88738.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
type-F conjugative transfer system pilin assembly protein TrbC
SCN18_25_1_16_R1_B_scaffold_1083_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12802..12888
DNA (87bp) protein (29aa)
Displaying 18 items

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