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SCN18_25_1_16_R1_B_scaffold_235_31

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 33773..34729

Top 3 Functional Annotations

Value Algorithm Source
nodulation protein NfeD n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00036E5F7A similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 312.0
  • Bit_score: 321
  • Evalue 6.10e-85
nodD1; Nodulation protein D 1 similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 320.0
  • Bit_score: 325
  • Evalue 1.50e-86
Nodulation protein D 1 {ECO:0000313|EMBL:CDF83718.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 320.0
  • Bit_score: 325
  • Evalue 7.70e-86

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
GTGAAATTCCATCGACTCGACCTGAATCTCCTGGTCACGCTGGATGTCCTGCTTTCGGAGAAAAGCATCACCCGCGCCGCGCGGCGCCTCAACAAGAGTCCGTCGGCCACCAGCGAAGCCCTGGGCCGGCTGCGTGAGTTCTTCGAGGATCAGCTGCTGACGCCCATCGGGCGCAGCATGGTCCCGACCCCGCTGGGCGAGAGCCTCGCCGCATCGGTGCGGCAATGCCTGATCCACGTACGCGCGACGGTCGAGGCGCGCCCGGTTTTCGATCCGGCGCAGTCGCAGCGGCAGTTTCGCCTGATGCTTTCCGACTATGTGTCGACGGTGCTCATGAGCGGCGTGCTGCAGCGCCTGCGTCGGGAGGCGCCCAACGTCACCATCGACATGATGCCGCTCATGGACGATCCCAGGACGGCACTCGATCGGGGAGAGTTCGATTTCCTCGTCGTCCCGGAACACTTCCGGCACGAGGGACATCCGTGGGAAGAGCTGTTCCGGGATGAATATGTCTGCGCCACCTGGTCGGAAAACCCGCTGGTCGGCGAGAGCCTGACGCTGGAGCAGTTCCTCGAGCTGGGTCATGTGCGGCCCAGCTTCGGCATGTGGCAACGCACACCCGCGATCGAGGAGTGGTTCCTGGCGCGTTTCGGCCGCGAGCGCCGCGTCGAGGTGGTGACCACCACCTTCAACAACGTGCCGCAGCTGCTGGTCGGCACCCACCGGATCGCAACCATGCACCGGCGCCTGGCGGAGTACTACGTCGACCGCCTGCCCCTGCGCCTGCTGGCGCCTCCGCTCGAGATGCCGCCGCTGATCGAGATCATCCAGTGGCACAAGTACAGCAGCGCCGATCCGGCCCTGCACTGGATGCTGGGCGTCCTCAAGGAATGCGCGGACGCCGGCACAGACCGGCCCGCGAGCCCGATTCGAAGCCGGCCGGCTATCGCCTCCTGA
PROTEIN sequence
Length: 319
VKFHRLDLNLLVTLDVLLSEKSITRAARRLNKSPSATSEALGRLREFFEDQLLTPIGRSMVPTPLGESLAASVRQCLIHVRATVEARPVFDPAQSQRQFRLMLSDYVSTVLMSGVLQRLRREAPNVTIDMMPLMDDPRTALDRGEFDFLVVPEHFRHEGHPWEELFRDEYVCATWSENPLVGESLTLEQFLELGHVRPSFGMWQRTPAIEEWFLARFGRERRVEVVTTTFNNVPQLLVGTHRIATMHRRLAEYYVDRLPLRLLAPPLEMPPLIEIIQWHKYSSADPALHWMLGVLKECADAGTDRPASPIRSRPAIAS*