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SCN18_25_1_16_R1_B_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_235_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55..453
DNA (399bp) protein (133aa)
PRTRC system protein B n=1 Tax=Rhodanobacter denitrificans RepID=M4NG49_9GAMM
PRTRC system protein B
PRTRC system protein B {ECO:0000313|EMBL:AGG89047.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_1_16_R1_B_scaffold_235_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

453..881
DNA (429bp) protein (143aa)
Peptidase M61 n=1 Tax=Thauera sp. 28 RepID=N6ZJI4_9RHOO
Peptidase M61 {ECO:0000313|EMBL:ENO80899.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
PDZ domain protein
SCN18_25_1_16_R1_B_scaffold_235_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

878..2110
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KDI7_THASP
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KIN91054.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
major facilitator superfamily protein
SCN18_25_1_16_R1_B_scaffold_235_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2126..2926)
DNA (801bp) protein (267aa)
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000255|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000255|HAMAP-Rule:MF_00134};; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=TRPC_CUPTR
SCN18_25_1_16_R1_B_scaffold_235_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2942..3985)
DNA (1044bp) protein (348aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HWM7_9BURK
SCN18_25_1_16_R1_B_scaffold_235_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3991..4554)
DNA (564bp) protein (188aa)
trpG; anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUH7_JANMA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_25_1_16_R1_B_scaffold_235_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4587..6068)
DNA (1482bp) protein (494aa)
Anthranilate synthase component I {ECO:0000313|EMBL:KIF80382.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KIF80382.1};; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
trpE; anthranilate synthase component I (EC:4.1.3.27)
anthranilate synthase subunit I n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FF7715
SCN18_25_1_16_R1_B_scaffold_235_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6349..7056)
DNA (708bp) protein (236aa)
gph; phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
Phosphoglycolate phosphatase n=2 Tax=Burkholderiaceae RepID=Q0K6I4_CUPNH
SCN18_25_1_16_R1_B_scaffold_235_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7053..7745)
DNA (693bp) protein (231aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
ribulose-phosphate 3-epimerase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F742F1
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCN18_25_1_16_R1_B_scaffold_235_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7829..8239
DNA (411bp) protein (137aa)
Protein ApaG n=1 Tax=Burkholderia cepacia GG4 RepID=J7JAJ5_BURCE
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1365108 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. A9.;"
ApaG protein
SCN18_25_1_16_R1_B_scaffold_235_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8669..9652
DNA (984bp) protein (328aa)
mltA; membrane-bound lytic murein transglycosylase (EC:3.2.1.-)
MltA specific insert domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0T6_9BURK
MltA specific insert domain protein {ECO:0000313|EMBL:EFV93751.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
SCN18_25_1_16_R1_B_scaffold_235_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9697..10755)
DNA (1059bp) protein (353aa)
SAM-dependent methyltransferase PhcB n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372BECF
Uncharacterized protein {ECO:0000313|EMBL:CDX40541.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_235_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10876..11238)
DNA (363bp) protein (121aa)
UPI0003CFEDD8 related cluster n=1 Tax=unknown RepID=UPI0003CFEDD8
Uncharacterized protein {ECO:0000313|EMBL:ESZ25963.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_235_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11377..12933)
DNA (1557bp) protein (519aa)
UPI0003CFA516 related cluster n=1 Tax=unknown RepID=UPI0003CFA516
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:CDX14445.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
LuxR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_235_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13099..13851)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0T5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV93750.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
thiol:disulfide interchange protein
SCN18_25_1_16_R1_B_scaffold_235_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13928..15205)
DNA (1278bp) protein (426aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:EFV93749.1}; EC=1.14.13.- {ECO:0000313|EMBL:EFV93749.1};; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0T4_9BURK
ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
SCN18_25_1_16_R1_B_scaffold_235_trna_1
unknown

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15339..15411
DNA (73bp)
transferRNA Phe
SCN18_25_1_16_R1_B_scaffold_235_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15733..18408
DNA (2676bp) protein (892aa)
Excinuclease ABC, A subunit n=2 Tax=Burkholderia RepID=B2SZY3_BURPP
excinuclease ABC subunit A
Excinuclease ABC, A subunit {ECO:0000313|EMBL:ACD14544.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCN18_25_1_16_R1_B_scaffold_235_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18519..19442)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003720F0A
Uncharacterized protein {ECO:0000313|EMBL:KJC33608.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
LysR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_235_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19553..20896
DNA (1344bp) protein (448aa)
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 (EC:1.14.13.-)
Ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region n=1 Tax=Pseudomonas putida CSV86 RepID=L1LU76_PSEPU
Ferredoxin {ECO:0000313|EMBL:KIY42677.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
SCN18_25_1_16_R1_B_scaffold_235_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20915..21856
DNA (942bp) protein (314aa)
Acetamidase/Formamidase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RRK5_9RHOB
Amidase {ECO:0000313|EMBL:KJB95700.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative acetamidase/formamidase family protein
SCN18_25_1_16_R1_B_scaffold_235_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21890..23134
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003642FF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87560.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCN18_25_1_16_R1_B_scaffold_235_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23250..24395
DNA (1146bp) protein (382aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J46_DECAR
Branched-chain amino acid ABC transporter, amino acid-binding protein
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:CDM22988.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_235_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24398..25423)
DNA (1026bp) protein (342aa)
Quinone oxidoreductase n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B5T1_9BURK
NADPH:quinone oxidoreductase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_25_1_16_R1_B_scaffold_235_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25548..26522
DNA (975bp) protein (325aa)
Transcriptional regulator n=2 Tax=Pseudomonas RepID=J2N778_9PSED
Transcriptional regulator {ECO:0000313|EMBL:EJM06364.1}; TaxID=1144322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM16.;"
nodulation protein NfeD
SCN18_25_1_16_R1_B_scaffold_235_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26519..27778)
DNA (1260bp) protein (420aa)
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein; K00441 coenzyme F420 hydrogenase beta subunit [EC:1.12.98.1] id=14426218 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin1_lowGC organism_group=Unknown_CP
coenzyme F420-dependent hydrogenase beta subunit (EC:1.12.98.1)
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
SCN18_25_1_16_R1_B_scaffold_235_26
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27831..30233)
DNA (2403bp) protein (801aa)
Radical SAM domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIE0_THET1
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACZ43511.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCN18_25_1_16_R1_B_scaffold_235_27
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30242..30901)
DNA (660bp) protein (220aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
2-phospho-L-lactate guanylyltransferase (EC:2.7.7.68)
2-phospho-L-lactate guanylyltransferase n=1 Tax=Ralstonia sp. PBA RepID=I9KPY7_9RALS
SCN18_25_1_16_R1_B_scaffold_235_28
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30907..31851)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00035E7D71
LPPG:FO 2-phospho-L-lactate transferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_25_1_16_R1_B_scaffold_235_29
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31848..32621)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000381F660
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 69 in total

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