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SCN18_25_1_16_R1_B_scaffold_420_18

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(17669..19129)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XEG5_METSD similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 466.0
  • Bit_score: 454
  • Evalue 7.00e-125
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 466.0
  • Bit_score: 454
  • Evalue 2.00e-125
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 476.0
  • Bit_score: 529
  • Evalue 4.10e-147

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
GTGAGGGCGCGCCTGGCCTGCCTGGCGGCATCGCTGGCGATGCTGGCCGGATGCGCTCCGATGGGGCCCGACTACCGGCGCCCGGCGTCGGAGCTGCCCGAGCGCTTTGCCGACGCCGCGCCGGCCGAAGGCGCCGCCTCCGCTGCCGTGGCGCCCGACTGGTGGCGGCTGTACGGCGATGCGCAGCTCGATCGCCTGGTCGAGGCGGCTCTGGCGCACAACGCGGACCTGCGCCTGGCCGCGGCGCAGGTCGAGGAGGCCGAGGCGGTGCTGCGCGAGGCGTTCGCGGTGCTCGCGCCGCAGATCGACCTGGGCGCGACGTCGGCGCGCTCGCGCGCCAGCCGGATGACCACGCAACCCGTCCCGGCGGGCGTGCCGGTGGTCGGCGACAATCATCGGCTCGCCCTGTCGAGCGCCTACGAGATCGATTTCTGGGGCCGGCTGCGCCGCAGCGCCGAGGCGGCGCAGGCCCAGCTGATGGCGAGCCGCTACGGCCGCGACGTGATCGCCCTGAGCCTGTCCGGTACGGTGGTCCAGGGCTGGTTCGCGCTGCGCTCGCTCGATGCGCAGATCGCCGTCACCCGCGAGGGCCTGGGGGTGCGCGAGGAGTCCCTGGCGCTGGCGCGCGCGCGGGCGCGCGGCGGCCTGGTCTCGGACCTGGACGTCTACCAGGCCGAGGGCGCGCGCGCCGACGCGGCCGTGCAGCTGAACGAGTTGCAGCGCCAGCGCACCGCGCTCGAGCACCTGCTGGGCACGCTCAGCGGCCGGCTCGACCTGCGCGTGCCGCCGGGCGAGCTGCAGGCGATGCCCGAGGCGCCGTTGCCGCCGCCGGGCCTGCCCTCGGCGCTGCTCGACCGGCGTCCCGACATCCGCCAGGCCGAGGCCGGGCTGCAGGCGGCCAACGCCCGCATCGGCGTGGCGCGCGCGGCGATGATGCCGACGATCTCGCTCACCGGCACGTTCGGCGGCCAGAGCAGCGCGCTGTCCGACCTGCTCGCCGGCGGTGCGCGCATCTGGTCGATCGGCTTCGGCCTGAGCCTGCCGATCTTCGATGCGGGCCGCCTGCAGGCGCGCCTGGAGCAGACCGAGGCGCGCGAGCGCCAGGCGCTGATCGCCTACCAGAAGGCCGCCGAGACGGCGTTTCGCGAGGTCGCCGATGCCCTCGTCGACAACGAGCGCGGCGCGCAGGCCGAGCGCGAGCTGCAGGCGCGCGTGGCGGCCGCGCGCAACACCTCGCGGCTGGCGCGCACGCGCTACGAGGGCGGCTACTCGGGCTATCTCGAGGTGCTCGACGCCCTGCGCAGCCAGAACGACGCCGAGCTGGCGCTGATCCGCAGCCGCCAGGCGCGGCTGGCCTACAGCGTCGACTTGATGAAGGCGCTGGGCGGCGGCTGGTCCGACGGTCCCGAGCCATCGGCCGAGGCGCGAAACGGCGAGCGTTCGCGCAGCTCGTCCAGGTAG
PROTEIN sequence
Length: 487
VRARLACLAASLAMLAGCAPMGPDYRRPASELPERFADAAPAEGAASAAVAPDWWRLYGDAQLDRLVEAALAHNADLRLAAAQVEEAEAVLREAFAVLAPQIDLGATSARSRASRMTTQPVPAGVPVVGDNHRLALSSAYEIDFWGRLRRSAEAAQAQLMASRYGRDVIALSLSGTVVQGWFALRSLDAQIAVTREGLGVREESLALARARARGGLVSDLDVYQAEGARADAAVQLNELQRQRTALEHLLGTLSGRLDLRVPPGELQAMPEAPLPPPGLPSALLDRRPDIRQAEAGLQAANARIGVARAAMMPTISLTGTFGGQSSALSDLLAGGARIWSIGFGLSLPIFDAGRLQARLEQTEARERQALIAYQKAAETAFREVADALVDNERGAQAERELQARVAAARNTSRLARTRYEGGYSGYLEVLDALRSQNDAELALIRSRQARLAYSVDLMKALGGGWSDGPEPSAEARNGERSRSSSR*