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SCN18_25_1_16_R1_B_scaffold_313

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_313_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1044
DNA (1044bp) protein (348aa)
Putative sulfoacetaldehyde acetyltransferase {ECO:0000313|EMBL:CCD03738.1}; EC=2.3.3.15 {ECO:0000313|EMBL:CCD03738.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Putative sulfoacetaldehyde acetyltransferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B0M9_AZOBR
xsc; putative sulfoacetaldehyde acetyltransferase
SCN18_25_1_16_R1_B_scaffold_313_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1140..2153
DNA (1014bp) protein (338aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase Pta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3L4_9RHIZ
Phosphate acetyltransferase {ECO:0000313|EMBL:EXL06736.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCN18_25_1_16_R1_B_scaffold_313_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2376..7382)
DNA (5007bp) protein (1669aa)
Outer membrane autotransporter barrel n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIX3_NITHX
Extracellular serine protease {ECO:0000313|EMBL:CEJ10539.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Outer membrane autotransporter barrel
SCN18_25_1_16_R1_B_scaffold_313_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7490..9076)
DNA (1587bp) protein (529aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CUQ0_9BRAD
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJN13064.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
two component transcriptional regulator, winged helix family
SCN18_25_1_16_R1_B_scaffold_313_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9417..11861)
DNA (2445bp) protein (815aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003769248
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ERF80264.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase
SCN18_25_1_16_R1_B_scaffold_313_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12321..14228)
DNA (1908bp) protein (636aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DRG3_BRAJP
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:BAL09308.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
AMP-binding protein
SCN18_25_1_16_R1_B_scaffold_313_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14809..15450)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3WZF2_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL49008.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCN18_25_1_16_R1_B_scaffold_313_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15487..16707)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0D9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53551.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_313_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16884..17633
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WFU6_BURSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG17486.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
SCN18_25_1_16_R1_B_scaffold_313_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17630..17920
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GPL4_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESZ46350.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
SCN18_25_1_16_R1_B_scaffold_313_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18062..18991)
DNA (930bp) protein (310aa)
Putative copper resistance protein D n=2 Tax=Oligotropha carboxidovorans RepID=F8BQY3_OLICM
Bradyrhizobium elkanii strain UASWS1015 Contig152, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52999.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative copper resistance protein D
SCN18_25_1_16_R1_B_scaffold_313_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18988..19356)
DNA (369bp) protein (123aa)
Copper resistance protein CopC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N1_9BRAD
Copper resistance protein CopC {ECO:0000313|EMBL:EFI52911.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
copper resistance protein C
SCN18_25_1_16_R1_B_scaffold_313_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19460..19762)
DNA (303bp) protein (101aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JJY3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05237.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_25_1_16_R1_B_scaffold_313_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19860..21239)
DNA (1380bp) protein (460aa)
Twin-arginine translocation pathway signal n=3 Tax=Oligotropha carboxidovorans RepID=B6JJY6_OLICO
multicopper oxidase
Multicopper oxidase, TAT pathway translocated {ECO:0000313|EMBL:AEI05234.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_25_1_16_R1_B_scaffold_313_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21252..22712)
DNA (1461bp) protein (487aa)
Outer membrane efflux protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJY7_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig156, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52674.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
outer membrane efflux protein
SCN18_25_1_16_R1_B_scaffold_313_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22722..23021)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQX2_OLICM
Bradyrhizobium elkanii strain UASWS1015 Contig156, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52673.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_313_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23101..23532)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFM4_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KIZ44777.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_313_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23827..24879)
DNA (1053bp) protein (351aa)
SCN18_25_1_16_R1_B_scaffold_313_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25153..27384
DNA (2232bp) protein (744aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FYH9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KGJ64932.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
caspase domain-containing protein
SCN18_25_1_16_R1_B_scaffold_313_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27387..28922
DNA (1536bp) protein (512aa)
UPI0003D6C832 related cluster n=1 Tax=unknown RepID=UPI0003D6C832
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:KIC07985.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
peptidase C14, caspase catalytic subunit p20
SCN18_25_1_16_R1_B_scaffold_313_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28936..30171)
DNA (1236bp) protein (412aa)
MFS transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003780182
MFS transporter {ECO:0000313|EMBL:KJC36084.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
major facilitator superfamily transporter
SCN18_25_1_16_R1_B_scaffold_313_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30353..31003)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4XTA0_9PSED
TetR family transcriptional regulator {ECO:0000313|EMBL:ELQ84972.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
TetR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_313_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31022..31660)
DNA (639bp) protein (213aa)
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Phosphatidyl-N-methylethanolamine N-methyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AM8_RHOPB
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KJC40490.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCN18_25_1_16_R1_B_scaffold_313_24
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31675..32886)
DNA (1212bp) protein (404aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=MNMA_RHOP2
SCN18_25_1_16_R1_B_scaffold_313_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33181..33807
DNA (627bp) protein (209aa)
SCN18_25_1_16_R1_B_scaffold_313_26
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34286..34786
DNA (501bp) protein (167aa)
Flagellar hook-length control protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AN0_RHOPB
flagellar hook-length control protein
Flagellar hook-length control protein {ECO:0000313|EMBL:ABD86556.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_25_1_16_R1_B_scaffold_313_27
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34796..35497
DNA (702bp) protein (234aa)
Flagellar hook capping protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AN1_RHOPB
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:ABD86555.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_25_1_16_R1_B_scaffold_313_28
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35684..35959
DNA (276bp) protein (92aa)
Uncharacterized protein n=25 Tax=Bradyrhizobiaceae RepID=A4Z085_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE41068.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_25_1_16_R1_B_scaffold_313_29
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36105..37748
DNA (1644bp) protein (548aa)
Flagellar M-ring protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AS5_RHOPB
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
fliF; flagellar MS-ring protein
SCN18_25_1_16_R1_B_scaffold_313_30
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37751..38839
DNA (1089bp) protein (363aa)
Flagellar motor switch protein FliG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC0_NITHX
fliG; flagellar motor switch protein G
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying items 1-30 of 47 in total

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