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SCN18_25_1_16_R1_B_scaffold_400

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_400_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..527
DNA (525bp) protein (175aa)
Putative transmembrane efflux pump (Multidrug resistance related protein) n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RIN0_FRAAA
Uncharacterized protein {ECO:0000313|EMBL:CDP50080.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
transmembrane efflux protein
SCN18_25_1_16_R1_B_scaffold_400_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

625..1365
DNA (741bp) protein (247aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJX8_MESCW
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADV10235.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_25_1_16_R1_B_scaffold_400_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1374..2231
DNA (858bp) protein (286aa)
Heat shock protein HspQ n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRE0_9BRAD
Heat shock protein HspQ {ECO:0000313|EMBL:ERF86570.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
alpha/beta hydrolase fold family hydrolase
SCN18_25_1_16_R1_B_scaffold_400_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2378..3196
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PVC4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42303.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter related
SCN18_25_1_16_R1_B_scaffold_400_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3183..5126
DNA (1944bp) protein (648aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HP32_9BRAD
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:ERF86568.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
AMP-dependent synthetase and ligase
SCN18_25_1_16_R1_B_scaffold_400_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5130..6017
DNA (888bp) protein (296aa)
Carbonic anhydrase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H9Q7_9BRAD
Carbonic anhydrase {ECO:0000313|EMBL:ERF86567.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
inner-membrane translocator
SCN18_25_1_16_R1_B_scaffold_400_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6022..7095
DNA (1074bp) protein (358aa)
MFS transporter, ACS family, tartrate transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HQ48_9BRAD
MFS transporter, ACS family, tartrate transporter {ECO:0000313|EMBL:ERF86566.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
inner-membrane translocator
SCN18_25_1_16_R1_B_scaffold_400_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7112..7918
DNA (807bp) protein (269aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRD5_9BRAD
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ERF86565.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ABC transporter related
SCN18_25_1_16_R1_B_scaffold_400_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7998..9245
DNA (1248bp) protein (416aa)
Copper transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IUJ2_9BRAD
Copper transporter {ECO:0000313|EMBL:ERF86564.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative branched-chain amino acid transport system substrate-binding protein
SCN18_25_1_16_R1_B_scaffold_400_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9362..10306)
DNA (945bp) protein (315aa)
dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003752CCE
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:BAL11831.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_25_1_16_R1_B_scaffold_400_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10340..10855)
DNA (516bp) protein (172aa)
Ureidoglycolate lyase {ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|SAAS:SAAS00181913};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Putative ureidoglycolate hydrolase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CM11_MYXFH
putative ureidoglycolate hydrolase
SCN18_25_1_16_R1_B_scaffold_400_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10857..11600)
DNA (744bp) protein (248aa)
ABC transporter (EC:3.6.3.-)
ABC transporter family protein 33 {ECO:0000313|EMBL:ADP15734.1}; EC=3.6.3.- {ECO:0000313|EMBL:ADP15734.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
ABC transporter family protein 33 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HM32_ACHXA
SCN18_25_1_16_R1_B_scaffold_400_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11597..12316)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037ADD03
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGD92247.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
braF3; high-affinity branched-chain amino acid transport ATP-binding protein BRAF 3
SCN18_25_1_16_R1_B_scaffold_400_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12313..13296)
DNA (984bp) protein (328aa)
Inner-membrane translocator 25 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HM34_ACHXA
ABC transporter permease {ECO:0000313|EMBL:KGD92248.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
inner-membrane translocator
SCN18_25_1_16_R1_B_scaffold_400_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13296..14192)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003756E45
ABC transporter permease {ECO:0000313|EMBL:KGD92249.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
inner-membrane translocator
SCN18_25_1_16_R1_B_scaffold_400_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14213..15442)
DNA (1230bp) protein (410aa)
Receptor family ligand binding region family protein 11 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HM36_ACHXA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGD92250.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
receptor family ligand binding region family protein 11
SCN18_25_1_16_R1_B_scaffold_400_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15605..16672)
DNA (1068bp) protein (356aa)
Asparaginase/glutaminase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z838_METPB
asparaginase/glutaminase
Asparaginase/glutaminase {ECO:0000313|EMBL:ACB79005.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCN18_25_1_16_R1_B_scaffold_400_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16767..17447)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKD3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08302.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_400_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17434..18126)
DNA (693bp) protein (231aa)
ABC transporter ATP-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002D869B4
Uncharacterized protein {ECO:0000313|EMBL:EKS42468.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter-like protein
SCN18_25_1_16_R1_B_scaffold_400_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18123..18869)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PIJ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42467.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter-like protein
SCN18_25_1_16_R1_B_scaffold_400_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18866..19789)
DNA (924bp) protein (308aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKD0_9BRAD
ABC transporter permease protein {ECO:0000313|EMBL:EGP08299.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
inner-membrane translocator
SCN18_25_1_16_R1_B_scaffold_400_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19789..20685)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PSE9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42465.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
inner-membrane translocator
SCN18_25_1_16_R1_B_scaffold_400_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20769..22067)
DNA (1299bp) protein (433aa)
ABC-type transport system periplasmic substrate-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QKC8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42464.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
extracellular ligand-binding receptor
SCN18_25_1_16_R1_B_scaffold_400_24
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22131..22511)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PVR5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42463.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_400_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22536..24011)
DNA (1476bp) protein (492aa)
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PII9_9BRAD
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component {ECO:0000313|EMBL:EKS42462.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
4-hydroxyphenylacetate 3-hydroxylase
SCN18_25_1_16_R1_B_scaffold_400_26
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24053..24571)
DNA (519bp) protein (173aa)
oxygenase n=1 Tax=Afipia birgiae RepID=UPI00030E0293
Uncharacterized protein {ECO:0000313|EMBL:EKS42461.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
FMN-binding flavin reductase
SCN18_25_1_16_R1_B_scaffold_400_27
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24741..25331
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EB7C21
Uncharacterized protein {ECO:0000313|EMBL:EKS42460.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
marR; regulatory protein
SCN18_25_1_16_R1_B_scaffold_400_28
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25650..27080
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DEE1_BRAJP
MFS transporter {ECO:0000313|EMBL:KGT76156.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
MFS transporter
SCN18_25_1_16_R1_B_scaffold_400_29
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27162..27287
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJX1_AFIFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS27850.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCN18_25_1_16_R1_B_scaffold_400_trna_1
unknown

Not on your lists

27810..27901
DNA (92bp)
transferRNA SeC(p)
Displaying items 1-30 of 42 in total

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