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SCN18_25_1_16_R1_B_scaffold_491

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_491_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..405
DNA (405bp) protein (135aa)
SCN18_25_1_16_R1_B_scaffold_491_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

405..809
DNA (405bp) protein (135aa)
SCN18_25_1_16_R1_B_scaffold_491_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1330..1575
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138Y6_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE39353.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_25_1_16_R1_B_scaffold_491_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1842..2240
DNA (399bp) protein (133aa)
SCN18_25_1_16_R1_B_scaffold_491_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2237..2548
DNA (312bp) protein (104aa)
SCN18_25_1_16_R1_B_scaffold_491_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2545..2838
DNA (294bp) protein (98aa)
SCN18_25_1_16_R1_B_scaffold_491_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2838..3032
DNA (195bp) protein (65aa)
SCN18_25_1_16_R1_B_scaffold_491_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3019..3381
DNA (363bp) protein (121aa)
SCN18_25_1_16_R1_B_scaffold_491_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3553..4545
DNA (993bp) protein (331aa)
UPI0003CDE08B related cluster n=1 Tax=unknown RepID=UPI0003CDE08B
Phage integrase {ECO:0000313|EMBL:CCD95758.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
phage integrase family protein
SCN18_25_1_16_R1_B_scaffold_491_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4567..5979
DNA (1413bp) protein (471aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000255|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000255|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01037}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=TRMFO_RHOPA
gid; tRNA (uracil-5-)-methyltransferase Gid
SCN18_25_1_16_R1_B_scaffold_491_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6000..7085
DNA (1086bp) protein (362aa)
Serine/threonine protein kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMD0_NITHX
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABE62617.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R1_B_scaffold_491_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7236..8783)
DNA (1548bp) protein (516aa)
Long-chain acyl-CoA synthetase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1INI4_9BRAD
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:ERF84254.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
long-chain-fatty-acid--CoA ligase
SCN18_25_1_16_R1_B_scaffold_491_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8919..9716)
DNA (798bp) protein (266aa)
Aminoglycoside N6'-acetyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IKB8_9BRAD
Aminoglycoside N6'-acetyltransferase {ECO:0000313|EMBL:ERF84255.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
enoyl-CoA hydratase
SCN18_25_1_16_R1_B_scaffold_491_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9823..10701
DNA (879bp) protein (293aa)
oxidoreductase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035D800E
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABJ05729.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_25_1_16_R1_B_scaffold_491_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10932..12509
DNA (1578bp) protein (526aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139Y6_RHOPS
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABE39103.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_25_1_16_R1_B_scaffold_491_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12590..13864)
DNA (1275bp) protein (425aa)
Acyl-CoA dehydrogenase-like n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IU14_RHOP2
Acyl-CoA dehydrogenase-like
Acyl-CoA dehydrogenase-like {ECO:0000313|EMBL:ABD08296.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_25_1_16_R1_B_scaffold_491_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14041..14820
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJC59224.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJC59224.1};; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl CoA hydratase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D427_BRAJP
SCN18_25_1_16_R1_B_scaffold_491_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14987..15370)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EFV3_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ35047.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_25_1_16_R1_B_scaffold_491_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15373..16374)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZB69_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KGJ68489.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_491_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16378..17172)
DNA (795bp) protein (265aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJC59262.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJC59262.1};; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
enoyl-CoA hydratase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003621239
SCN18_25_1_16_R1_B_scaffold_491_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17352..18131
DNA (780bp) protein (260aa)
Possible oxoacyl carrier protein reductase {ECO:0000313|EMBL:CAE27198.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CAE27198.1};; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
Short-chain dehydrogenase/reductase SDR n=2 Tax=Rhodopseudomonas palustris RepID=B3Q9K8_RHOPT
oxoacyl carrier protein reductase
SCN18_25_1_16_R1_B_scaffold_491_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18230..19900
DNA (1671bp) protein (557aa)
Sulfatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB2_NITHX
sulfatase
Sulfatase {ECO:0000313|EMBL:ABE64035.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R1_B_scaffold_491_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19894..21000)
DNA (1107bp) protein (369aa)
Regulatory protein LuxR n=2 Tax=Rhizobium meliloti RepID=F6EBB8_SINMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY76880.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCN18_25_1_16_R1_B_scaffold_491_24
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21153..22670
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GBY4_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL78271.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R1_B_scaffold_491_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22788..23672
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Xanthobacteraceae RepID=UPI0003771611
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADH90740.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCN18_25_1_16_R1_B_scaffold_491_26
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23831..25045)
DNA (1215bp) protein (405aa)
Secretion protein HlyD n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XJ8_RHOPB
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABD90138.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_25_1_16_R1_B_scaffold_491_27
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25035..28217)
DNA (3183bp) protein (1061aa)
RND transporter n=1 Tax=Afipia birgiae RepID=UPI000306A7D4
Uncharacterized protein {ECO:0000313|EMBL:EKS39659.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_491_28
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28435..29715)
DNA (1281bp) protein (427aa)
Putative pyridoxine biosynthesis protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLR9_9BRAD
Putative pyridoxine biosynthesis protein {ECO:0000313|EMBL:EGP07922.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
serine kinase
SCN18_25_1_16_R1_B_scaffold_491_29
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29712..30503)
DNA (792bp) protein (264aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
Hydroxypyruvate isomerase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S2L5_9BRAD
putative sugar isomerase
SCN18_25_1_16_R1_B_scaffold_491_30
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30535..31452)
DNA (918bp) protein (306aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HII8_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51656.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative dehydrogenase containing NAD(P)-binding domain
Displaying items 1-30 of 32 in total

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