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SCN18_25_1_16_R1_B_scaffold_631

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_631_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(189..2231)
DNA (2043bp) protein (681aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABE39600.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ABE39600.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137Y9_RHOPS
SCN18_25_1_16_R1_B_scaffold_631_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2234..3904)
DNA (1671bp) protein (557aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E22D6F
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46490.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCN18_25_1_16_R1_B_scaffold_631_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3959..5275)
DNA (1317bp) protein (439aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:ABE39598.1}; EC=5.4.3.8 {ECO:0000313|EMBL:ABE39598.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137Z1_RHOPS
class III aminotransferase
SCN18_25_1_16_R1_B_scaffold_631_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5414..6220
DNA (807bp) protein (269aa)
Regulatory proteins, IclR n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137Z7_RHOPS
regulatory protein IclR
Regulatory proteins, IclR {ECO:0000313|EMBL:ABE39592.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_25_1_16_R1_B_scaffold_631_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6334..7056)
DNA (723bp) protein (241aa)
Putative transcriptional regulatory protein IclR family n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GDR5_9BRAD
putative transcriptional regulatory protein IclR family
Putative transcriptional regulatory protein IclR family {ECO:0000313|EMBL:BAL78902.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R1_B_scaffold_631_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7060..7956)
DNA (897bp) protein (299aa)
Putative oxidoreductase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GDR6_9BRAD
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAL78903.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R1_B_scaffold_631_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8164..9021)
DNA (858bp) protein (286aa)
Putative carboxylesterase protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GDR8_9BRAD
Putative carboxylesterase protein {ECO:0000313|EMBL:EJZ30790.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
putative carboxylesterase protein
SCN18_25_1_16_R1_B_scaffold_631_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9018..9461)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GDR9_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL78906.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R1_B_scaffold_631_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9777..11219)
DNA (1443bp) protein (481aa)
gabD1; succinate-semialdehyde dehydrogenase [NADP+] 1 (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase [NADP+] 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HFP9_ACHXA
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJR63103.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
SCN18_25_1_16_R1_B_scaffold_631_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11379..12785)
DNA (1407bp) protein (469aa)
2-methylcitrate dehydratase n=3 Tax=Amycolatopsis mediterranei RepID=D8HNN0_AMYMU
prpD; 2-methylcitrate dehydratase
2-methylcitrate dehydratase {ECO:0000313|EMBL:AEK42401.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCN18_25_1_16_R1_B_scaffold_631_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12790..13707)
DNA (918bp) protein (306aa)
glxR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F4R5_9BURK
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EHK66716.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
SCN18_25_1_16_R1_B_scaffold_631_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13751..14959)
DNA (1209bp) protein (403aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GDR7_9BRAD
putative ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAL78904.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R1_B_scaffold_631_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15003..15872)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F4AB61
Alpha/beta hydrolase {ECO:0000313|EMBL:EJZ35413.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
alpha/beta hydrolase
SCN18_25_1_16_R1_B_scaffold_631_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15869..16249)
DNA (381bp) protein (127aa)
Branched-chain amino acid transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HK28_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ35412.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_631_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16251..18314)
DNA (2064bp) protein (688aa)
CoA-binding domain protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YWW5_9BURK
CoA-binding domain-containing protein {ECO:0000313|EMBL:EJZ35411.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
CoA-binding domain-containing protein
SCN18_25_1_16_R1_B_scaffold_631_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18334..19497)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R3K0_RALPI
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EJZ35410.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
acyl-CoA dehydrogenase
SCN18_25_1_16_R1_B_scaffold_631_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19609..20508
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y3P5_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EMS41792.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
LysR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_631_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20661..22424
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEM9_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49905.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
flavin-containing monooxygenase
SCN18_25_1_16_R1_B_scaffold_631_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22614..23663)
DNA (1050bp) protein (350aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V4E3_9PSEU
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EWC62342.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_631_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24040..24564
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDZ5_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL08141.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_25_1_16_R1_B_scaffold_631_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24746..24841)
DNA (96bp) protein (32aa)
Displaying 21 items

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