ggKbase home page

SCN18_25_1_16_R1_B_scaffold_1147

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1147_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
SCN18_25_1_16_R1_B_scaffold_1147_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

314..796
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037BECEC
Pseudoazurin {ECO:0000313|EMBL:EFI52469.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
pseudoazurin
SCN18_25_1_16_R1_B_scaffold_1147_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

783..1211
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07039.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCN18_25_1_16_R1_B_scaffold_1147_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1204..1473
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07040.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1147_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1743..3407
DNA (1665bp) protein (555aa)
Cbb3-type cytochrome oxidase, subunit CcoN n=3 Tax=Oligotropha carboxidovorans RepID=F8BN68_OLICM
ccoN2; cbb3-type cytochrome oxidase, subunit CcoN
Cbb3-type cytochrome oxidase, subunit CcoN {ECO:0000313|EMBL:AEI05687.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_25_1_16_R1_B_scaffold_1147_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3413..4150
DNA (738bp) protein (246aa)
ccoO; cbb3-type cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S7_9BRAD
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EFI51287.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCN18_25_1_16_R1_B_scaffold_1147_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4147..4323
DNA (177bp) protein (59aa)
Cbb3-type cytochrome oxidase, subunit CcoQ n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3B3_9RHIZ
cbb3-type cytochrome oxidase, subunit CcoQ
Cbb3-type cytochrome oxidase, subunit CcoQ {ECO:0000313|EMBL:AGK56707.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_25_1_16_R1_B_scaffold_1147_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4333..5211
DNA (879bp) protein (293aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S5_9BRAD
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ccoP2; cbb3-type cytochrome oxidase, subunit CcoP
SCN18_25_1_16_R1_B_scaffold_1147_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5208..5417
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQR0_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08153.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_25_1_16_R1_B_scaffold_1147_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5449..6258
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYM8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31268.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative cytochrome c oxidase subunit I
SCN18_25_1_16_R1_B_scaffold_1147_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6312..8579
DNA (2268bp) protein (756aa)
fixI; nitrogen fixation protein FixI (EC:3.6.3.-)
Nitrogen fixation protein FixI {ECO:0000313|EMBL:AEI05681.1}; EC=3.6.3.- {ECO:0000313|EMBL:AEI05681.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Copper-translocating P-type ATPase n=3 Tax=Oligotropha carboxidovorans RepID=B6JIK5_OLICO
SCN18_25_1_16_R1_B_scaffold_1147_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8669..8845
DNA (177bp) protein (59aa)
Nitrogen fixation protein FixS, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT09_RHOCS
fixS; nitrogen fixation protein FixS
Nitrogen fixation protein FixS, putative {ECO:0000313|EMBL:ACI98680.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_25_1_16_R1_B_scaffold_1147_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9178..9873)
DNA (696bp) protein (232aa)
3-oxoadipate CoA-transferase subunit B {ECO:0000313|EMBL:EGP09613.1}; EC=2.8.3.6 {ECO:0000313|EMBL:EGP09613.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
3-oxoacid CoA-transferase subunit B (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit B n=2 Tax=Bradyrhizobiaceae RepID=F7QH07_9BRAD
SCN18_25_1_16_R1_B_scaffold_1147_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9870..10541)
DNA (672bp) protein (224aa)
3-oxoadipate CoA-transferase subunit A {ECO:0000313|EMBL:EGP09614.1}; EC=2.8.3.6 {ECO:0000313|EMBL:EGP09614.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
3-oxoadipate CoA-transferase subunit A n=1 Tax=Afipia birgiae RepID=UPI00031D925C
3-oxoadipate CoA-transferase
SCN18_25_1_16_R1_B_scaffold_1147_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10868..11995
DNA (1128bp) protein (376aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QL87_9BRAD
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:BAR57396.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
AMACR; alpha-methylacyl-CoA racemase
Displaying 15 items

View Taxonomy