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SCN18_25_1_16_R1_B_scaffold_1512

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1512_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..789)
DNA (789bp) protein (263aa)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHL0_9BRAD
Phenylacetate-CoA oxygenase/reductase, PaaK subunit {ECO:0000313|EMBL:ERF84313.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ferredoxin reductase electron transfer component protein
SCN18_25_1_16_R1_B_scaffold_1512_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(956..1459)
DNA (504bp) protein (168aa)
Phenylacetate-CoA oxygenase, PaaJ subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1INN2_9BRAD
Phenylacetate-CoA oxygenase, PaaJ subunit {ECO:0000313|EMBL:ERF84314.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
phenylacetic acid degradation protein
SCN18_25_1_16_R1_B_scaffold_1512_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1453..2229)
DNA (777bp) protein (259aa)
Phenylacetate-CoA oxygenase, PaaI subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IKG7_9BRAD
Phenylacetate-CoA oxygenase, PaaI subunit {ECO:0000313|EMBL:ERF84315.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
paaC; phenylacetic acid degradation protein
SCN18_25_1_16_R1_B_scaffold_1512_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2378..2665)
DNA (288bp) protein (96aa)
Phenylacetate-CoA oxygenase subunit PaaB n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GC30_9BRAD
phenylacetate-CoA oxygenase subunit PaaB
Phenylacetate-CoA oxygenase subunit PaaB {ECO:0000313|EMBL:BAL78317.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R1_B_scaffold_1512_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2681..3673)
DNA (993bp) protein (331aa)
phenylacetate-CoA oxygenase subunit PaaA n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037D9D9D
Phenylacetate-CoA oxygenase {ECO:0000313|EMBL:KJC54310.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
phenylacetic acid degradation protein PaaA
SCN18_25_1_16_R1_B_scaffold_1512_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3747..4619)
DNA (873bp) protein (291aa)
Phenylacetic acid degradation operon negative regulatory protein PaaX n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHL5_9BRAD
Phenylacetic acid degradation operon negative regulatory protein PaaX {ECO:0000313|EMBL:ERF84318.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
paaX; phenylacetic acid degradation operon negative regulatory protein
SCN18_25_1_16_R1_B_scaffold_1512_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4583..4705)
DNA (123bp) protein (41aa)
SCN18_25_1_16_R1_B_scaffold_1512_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4832..5518
DNA (687bp) protein (229aa)
Transcriptional regulator, TetR family n=2 Tax=Rhodopseudomonas palustris RepID=B3QHF2_RHOPT
TetR family transcriptional regulator {ECO:0000313|EMBL:KIZ42389.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
TetR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_1512_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5829..6599)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T164_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE00191.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1512_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6817..8106)
DNA (1290bp) protein (430aa)
Blr2888 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89R84_BRADU
Uncharacterized protein {ECO:0000313|EMBL:BAR60060.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1512_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8286..8771)
DNA (486bp) protein (162aa)
Phasin n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK20_9BRAD
Phasin {ECO:0000313|EMBL:EKS41906.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
phasin 2
Displaying 11 items

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