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SCN18_13_7_16_R1_B_scaffold_1693

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1693_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..215)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=RL31_RHOP2
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_13_7_16_R1_B_scaffold_1693_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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391..2277
DNA (1887bp) protein (629aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHM4_NITHX
ABC transporter ATP-binding/permease
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:ABE64273.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_13_7_16_R1_B_scaffold_1693_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2315..2764)
DNA (450bp) protein (150aa)
Acetyltransferase, GNAT family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNZ3_NITWN
GCN5 family acetyltransferase {ECO:0000313|EMBL:KJC33766.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
N-acetyltransferase
SCN18_13_7_16_R1_B_scaffold_1693_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2895..3920)
DNA (1026bp) protein (342aa)
OmpA/MotB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHM6_NITHX
hypothetical protein
OmpA/MotB {ECO:0000313|EMBL:ABE64271.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_13_7_16_R1_B_scaffold_1693_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3920..4939)
DNA (1020bp) protein (340aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HID8_9BRAD
Flagellar motor protein MotA {ECO:0000313|EMBL:KJC33769.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1693_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5124..5837)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLR9_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11345.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_13_7_16_R1_B_scaffold_1693_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5937..6326)
DNA (390bp) protein (130aa)
SCN18_13_7_16_R1_B_scaffold_1693_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6609..7028)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000379F221
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49292.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1693_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7259..8662
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLT1_BRAJP
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49293.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
aldehyde dehydrogenase
SCN18_13_7_16_R1_B_scaffold_1693_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8749..9309
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IE6_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ08288.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_13_7_16_R1_B_scaffold_1693_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9740..10912
DNA (1173bp) protein (391aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NL04_AFIFE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS28215.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
acrE; acriflavine resistance protein E
SCN18_13_7_16_R1_B_scaffold_1693_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10920..12593
DNA (1674bp) protein (558aa)
acriflavine resistance protein B n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DF750
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ADU45579.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Displaying 12 items

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