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SCN18_13_7_16_R1_B_scaffold_3992

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_3992_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..773)
DNA (771bp) protein (257aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLP9_NITHX
extracellular solute-binding protein
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABE62848.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_13_7_16_R1_B_scaffold_3992_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1101..1916
DNA (816bp) protein (272aa)
Invasion associated locus B n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214M2_RHOPB
invasion associated locus B
Invasion associated locus B {ECO:0000313|EMBL:ABD88164.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_13_7_16_R1_B_scaffold_3992_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2054..2377)
DNA (324bp) protein (108aa)
Hemimethylated DNA binding protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QIU9_RHOPT
hemimethylated DNA-binding region
Uncharacterized protein {ECO:0000313|EMBL:CAE28110.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCN18_13_7_16_R1_B_scaffold_3992_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2538..3488
DNA (951bp) protein (317aa)
Auxin Efflux Carrier n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136Y2_RHOPS
Malonate transporter {ECO:0000313|EMBL:KIZ45497.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
auxin efflux carrier
SCN18_13_7_16_R1_B_scaffold_3992_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3566..4726)
DNA (1161bp) protein (387aa)
Putative hydrolase NrgC n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGW6_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43415.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hydroxylase
SCN18_13_7_16_R1_B_scaffold_3992_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4844..5749
DNA (906bp) protein (302aa)
UPI0003CEB5B0 related cluster n=1 Tax=unknown RepID=UPI0003CEB5B0
LysR family transcriptional regulator {ECO:0000313|EMBL:ESW92481.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
LysR family transcriptional regulator
Displaying 6 items

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