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SCN18_13_7_16_R1_B_scaffold_309

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_309_1
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(298..603)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IID1_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_2
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(600..1685)
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IID0_FLUTR
DNA replication and repair protein recF
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_3
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1685..2008)
DNA (324bp) protein (108aa)
SCN18_13_7_16_R1_B_scaffold_309_4
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2005..2625)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHN3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44811.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_309_5
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2622..3302)
DNA (681bp) protein (227aa)
O-methyltransferase family 3 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYA5_EMTOG
O-methyltransferase family 3
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_6
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3370..3858
DNA (489bp) protein (163aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKF1_FLUTR
tRNA/rRNA methyltransferase SpoU
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_7
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3907..4275
DNA (369bp) protein (123aa)
SCN18_13_7_16_R1_B_scaffold_309_8
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4313..4678
DNA (366bp) protein (122aa)
SCN18_13_7_16_R1_B_scaffold_309_9
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4748..5458)
DNA (711bp) protein (237aa)
Probable transcriptional regulatory protein Fluta_1167 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB76_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_10
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5617..5961
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000364F230
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCN18_13_7_16_R1_B_scaffold_309_11
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5954..6346
DNA (393bp) protein (131aa)
SCN18_13_7_16_R1_B_scaffold_309_12
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6352..7341)
DNA (990bp) protein (330aa)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM8_FLUTR
bifunctional phosphoglucose/phosphomannose isomerase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_13
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7440..7955
DNA (516bp) protein (172aa)
Thioesterase superfamily protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM7_FLUTR
thioesterase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_14
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7938..8918)
DNA (981bp) protein (327aa)
Glycosyl transferase family 9 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM6_FLUTR
glycosyl transferase 9
Glycosyl transferase family 9 {ECO:0000313|EMBL:AEA43643.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_309_15
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9037..9558
DNA (522bp) protein (174aa)
Ribosome maturation factor RimP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ4_FLUTR
Ribosome maturation factor rimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_309_16
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9566..10804
DNA (1239bp) protein (413aa)
NusA antitermination factor n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ5_FLUTR
NusA antitermination factor
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_17
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10843..13680
DNA (2838bp) protein (946aa)
Translation initiation factor IF-2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ6_FLUTR
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
translation initiation factor 2 (bIF-2)
SCN18_13_7_16_R1_B_scaffold_309_18
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13704..14303
DNA (600bp) protein (200aa)
putative Zn-ribbon-containing protein involved in phosphonate metabolism (EC:3.11.1.2)
Uncharacterized protein n=5 Tax=Myroides odoratimimus RepID=H1GQJ7_9FLAO
Phosphonoacetate hydrolase {ECO:0000313|EMBL:AJH16033.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
SCN18_13_7_16_R1_B_scaffold_309_19
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14377..15831
DNA (1455bp) protein (485aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHK0_FLUTR
RNA polymerase sigma-54 subunit RpoN/SigL
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:AEA43765.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_309_20
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15831..16490
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHK1_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_309_21
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16533..17372
DNA (840bp) protein (280aa)
Peptidase M48 Ste24p n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF91_FLUTR
peptidase M48 Ste24p
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_309_22
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17369..18130
DNA (762bp) protein (254aa)
arylformamidase (EC:3.5.1.9)
Probable arylformamidase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XRC3_FLAIG
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_309_23
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18265..18705
DNA (441bp) protein (147aa)
SCN18_13_7_16_R1_B_scaffold_309_24
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18763..19131
DNA (369bp) protein (123aa)
peptide-methionine (R)-S-oxide reductase (EC:1.8.4.11 1.8.4.12)
Peptide-methionine (R)-S-oxide reductase {ECO:0000313|EMBL:ADY52979.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ADY52979.1};; EC=1.8.4.12 {ECO:0000313|EMBL:ADY52979.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Peptide-methionine (R)-S-oxide reductase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE53_PEDSD
SCN18_13_7_16_R1_B_scaffold_309_25
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19283..19834)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K3M3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGE13630.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_309_26
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19853..20341)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CI45_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EPB65449.1}; Flags: Fragment;; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_309_27
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20353..20982)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PN58_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EQB91453.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica 502.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_309_28
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20963..21469)
DNA (507bp) protein (169aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Elizabethkingia RepID=H0KPD7_9FLAO
RNA polymerase {ECO:0000313|EMBL:KGO11192.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
sigW_4; ECF RNA polymerase sigma factor SigW
SCN18_13_7_16_R1_B_scaffold_309_29
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21686..22999
DNA (1314bp) protein (438aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAQ7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_309_30
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23078..23371)
DNA (294bp) protein (98aa)
Plasmid stabilization system n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CS23_ELIME
Plasmid stabilization protein {ECO:0000313|EMBL:KFF25510.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
plasmid stabilization system
Displaying items 1-30 of 82 in total

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