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SCN18_13_7_16_R1_B_scaffold_408

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_408_1
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..3438)
DNA (3438bp) protein (1146aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z7P4_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:EAQ68974.1}; TaxID=221360 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9917.;"
putative adhesin
SCN18_13_7_16_R1_B_scaffold_408_2
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3844..5223)
DNA (1380bp) protein (460aa)
NAD(P)H-quinone oxidoreductase subunit 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_3
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5229..6665)
DNA (1437bp) protein (479aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR6_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_4
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6671..8599)
DNA (1929bp) protein (643aa)
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH dehydrogenase subunit L n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR5_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_5
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8605..8931)
DNA (327bp) protein (109aa)
NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR4_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_6
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8931..9440)
DNA (510bp) protein (170aa)
NADH dehydrogenase subunit J (EC:1.6.5.3)
NADH dehydrogenase subunit J n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR3_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_7
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9437..9979)
DNA (543bp) protein (181aa)
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR2_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_8
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9997..11028)
DNA (1032bp) protein (344aa)
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR1_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_9
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11028..11996)
DNA (969bp) protein (323aa)
NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit G n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR0_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_10
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12018..13355)
DNA (1338bp) protein (446aa)
NADH dehydrogenase subunit F (EC:1.6.5.3)
NADH dehydrogenase subunit F {ECO:0000313|EMBL:AEA43949.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEA43949.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
NADH dehydrogenase subunit F n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ9_FLUTR
SCN18_13_7_16_R1_B_scaffold_408_11
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13362..13889)
DNA (528bp) protein (176aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E {ECO:0000313|EMBL:AEA43948.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEA43948.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
NADH dehydrogenase subunit E n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ8_FLUTR
SCN18_13_7_16_R1_B_scaffold_408_12
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13893..15116)
DNA (1224bp) protein (408aa)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_13
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15119..15631)
DNA (513bp) protein (171aa)
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH dehydrogenase subunit C {ECO:0000313|EMBL:AEA43946.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEA43946.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
NADH dehydrogenase subunit C n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ6_FLUTR
SCN18_13_7_16_R1_B_scaffold_408_14
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15618..16184)
DNA (567bp) protein (189aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ5_FLUTR
SCN18_13_7_16_R1_B_scaffold_408_15
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16172..16582)
DNA (411bp) protein (137aa)
NADH dehydrogenase subunit A (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ4_FLUTR
SCN18_13_7_16_R1_B_scaffold_408_16
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16758..17756)
DNA (999bp) protein (333aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBD7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_408_17
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18006..19238
DNA (1233bp) protein (411aa)
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICV4_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_18
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19334..20536
DNA (1203bp) protein (401aa)
GumN family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICV3_FLUTR
GumN family protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_19
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20551..20970)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003650CA1
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCN18_13_7_16_R1_B_scaffold_408_20
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21094..22221
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICV2_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_408_21
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22223..23665
DNA (1443bp) protein (481aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:AEA43394.1}; EC=1.2.1.8 {ECO:0000313|EMBL:AEA43394.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Betaine-aldehyde dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDM1_FLUTR
SCN18_13_7_16_R1_B_scaffold_408_22
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23671..24267
DNA (597bp) protein (199aa)
SCN18_13_7_16_R1_B_scaffold_408_23
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24309..25007)
DNA (699bp) protein (233aa)
Transcriptional regulator, TetR family n=2 Tax=Marinobacter RepID=E4PNP7_MARAH
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR {ECO:0000313|EMBL:CEJ71084.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
TetR family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_408_24
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25034..25327
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KR50_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53288.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCN18_13_7_16_R1_B_scaffold_408_25
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25340..25570
DNA (231bp) protein (77aa)
SCN18_13_7_16_R1_B_scaffold_408_26
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25833..26435)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XE75_CELAD
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_408_27
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26550..27353)
DNA (804bp) protein (268aa)
type 12 methyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374C6E7
Methyltransferase type 11 {ECO:0000313|EMBL:EHQ01842.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
methyltransferase type 11
SCN18_13_7_16_R1_B_scaffold_408_trna_3
unknown

Not on your lists

comp(27566..27639)
DNA (74bp)
transferRNA Ala
SCN18_13_7_16_R1_B_scaffold_408_28
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27748..28002)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDF0_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42326.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_408_29
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28131..28604)
DNA (474bp) protein (158aa)
TspO and MBR like protein id=4290158 bin=GWF2_Bacteroidetes_43_63 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
tryptophan-rich sensory protein
Tax=BJP_IG2102_Bacteroidetes_40_12
Displaying items 1-30 of 64 in total

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