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SCN18_13_7_16_R1_B_scaffold_734

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_734_1
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

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1..2844
DNA (2844bp) protein (948aa)
gliding motility-like protein
PKD domain containing protein id=4534882 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_734_2
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2907..3743)
DNA (837bp) protein (279aa)
Aldo/keto reductase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CP27_ELIME
Aldo/keto reductase {ECO:0000313|EMBL:EOR28896.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
oxidoreductase of aldo/keto reductase family, subgroup
SCN18_13_7_16_R1_B_scaffold_734_3
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3870..7073)
DNA (3204bp) protein (1068aa)
UvrD/REP helicase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDS4_FLUTR
UvrD/REP helicase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_734_4
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7417..8412
DNA (996bp) protein (332aa)
methionine synthase (EC:2.1.1.13)
Methionine synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9R9_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_734_5
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8498..8860
DNA (363bp) protein (121aa)
S23 ribosomal protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CA96_9FLAO
S23 ribosomal protein {ECO:0000313|EMBL:EJL67484.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_734_6
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8888..11551
DNA (2664bp) protein (888aa)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:AEA43066.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AEA43066.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
methionine synthase (B12-dependent) (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S0_FLUTR
SCN18_13_7_16_R1_B_scaffold_734_7
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11650..15387
DNA (3738bp) protein (1246aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S1_FLUTR
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_734_8
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15332..17734
DNA (2403bp) protein (801aa)
UvrD/REP helicase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIU4_FLUTR
UvrD/REP helicase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_734_9
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17797..18468
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FLH1_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10513.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_734_10
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18774..19805)
DNA (1032bp) protein (344aa)
Glycosyl transferase family 2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH85_FLUTR
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA42640.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_734_11
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19812..21290)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH84_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_734_12
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21396..21614
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:770 RepID=R6T6X8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC63561.1}; TaxID=1262751 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
SCN18_13_7_16_R1_B_scaffold_734_trna_1
unknown

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21480..21564
DNA (85bp)
transferRNA Ser
SCN18_13_7_16_R1_B_scaffold_734_13
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21661..22512)
DNA (852bp) protein (284aa)
Uncharacterized oxidoreductase {ECO:0000313|EMBL:CDR33123.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDR33123.1};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UM38_9CYAN
SCN18_13_7_16_R1_B_scaffold_734_14
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22826..23047)
DNA (222bp) protein (74aa)
SCN18_13_7_16_R1_B_scaffold_734_15
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23774..24424)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W376_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64433.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_734_16
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24534..25277)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W377_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64432.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
stress-induced acidophilic repeat motif-containing protein
SCN18_13_7_16_R1_B_scaffold_734_17
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25463..25588)
DNA (126bp) protein (42aa)
SCN18_13_7_16_R1_B_scaffold_734_18
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25710..26168)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CCA6_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ78699.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_13_7_16_R1_B_scaffold_734_19
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26493..27170
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MVG5_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM37123.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
SCN18_13_7_16_R1_B_scaffold_734_20
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27167..29014)
DNA (1848bp) protein (616aa)
DNA ligase D n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYR2_9FLAO
ATP-dependent DNA ligase {ECO:0000313|EMBL:KFF25158.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
ATP-dependent DNA ligase family protein
SCN18_13_7_16_R1_B_scaffold_734_21
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29091..29687)
DNA (597bp) protein (199aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase D-like 3'-phosphoesterase domain-containing protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JJP4_9FLAO
Putative DNA ligase-like protein/MT0965 {ECO:0000313|EMBL:CEJ70793.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
SCN18_13_7_16_R1_B_scaffold_734_22
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29678..30472)
DNA (795bp) protein (265aa)
Probable DNA repair protein HMPREF0204_11662 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYR4_9FLAO
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
Ku domain protein
SCN18_13_7_16_R1_B_scaffold_734_23
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30638..31168
DNA (531bp) protein (177aa)
Outer membrane protein-like protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBR8_SPHS2
hypothetical protein
Outer membrane protein-like protein {ECO:0000313|EMBL:ADZ78660.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Displaying 24 items

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