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SCN18_13_7_16_R1_B_scaffold_334

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_334_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..148
DNA (147bp) protein (49aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6R0_PALPW
Contig69, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76208.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
type II phosphodiesterase/nucleotide pyrophosphatase
SCN18_13_7_16_R1_B_scaffold_334_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(512..622)
DNA (111bp) protein (37aa)
SCN18_13_7_16_R1_B_scaffold_334_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

660..944
DNA (285bp) protein (95aa)
RNA-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI000361CDF5
RNA-binding protein
RNA-binding protein {ECO:0000313|EMBL:AHF14272.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_334_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

997..1254
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003638880
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17108.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_334_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1262..1705
DNA (444bp) protein (148aa)
Cold-shock DNA-binding protein family protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0VAI5_9BACT
Putative cold shock protein {ECO:0000313|EMBL:GAO43832.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
DNA-binding protein
SCN18_13_7_16_R1_B_scaffold_334_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1816..2139
DNA (324bp) protein (108aa)
SCN18_13_7_16_R1_B_scaffold_334_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2136..3206
DNA (1071bp) protein (357aa)
Linoleoyl-CoA desaturase {ECO:0000313|EMBL:AEW01851.1}; EC=1.14.19.3 {ECO:0000313|EMBL:AEW01851.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Linoleoyl-CoA desaturase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJV3_NIAKG
Linoleoyl-CoA desaturase
SCN18_13_7_16_R1_B_scaffold_334_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3274..4173
DNA (900bp) protein (300aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP9_NIAKG
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEW02902.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_334_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4229..4531)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000365ECF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17349.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_334_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4545..5612)
DNA (1068bp) protein (356aa)
Beta-ketoacyl-acyl-carrier-protein synthase I n=1 Tax=Niabella soli DSM 19437 RepID=H1NM52_9SPHI
3-oxoacyl-ACP synthase
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHF14734.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_334_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5873..7678)
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00035E63E8
Uncharacterized protein {ECO:0000313|EMBL:KIC91852.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_334_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7708..8139)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00030BCBD9
Uncharacterized protein {ECO:0000313|EMBL:KIC94468.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
conserved protein of unknown function
SCN18_13_7_16_R1_B_scaffold_334_13
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8253..8708)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00037B5926
Zinc-binding protein {ECO:0000313|EMBL:KIC89355.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_334_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8910..9299
DNA (390bp) protein (130aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Bacteroidales bacterium CF RepID=U5Q676_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_13_7_16_R1_B_scaffold_334_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9484..9834)
DNA (351bp) protein (117aa)
Uncharacterized conserved protein UCP033199 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBZ2_SPHS2
hypothetical protein
Uncharacterized conserved protein UCP033199 {ECO:0000313|EMBL:ADZ81565.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_13_7_16_R1_B_scaffold_334_16
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9985..11706
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036DD08A
Uncharacterized protein {ECO:0000313|EMBL:GAO42608.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_334_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11942..13258
DNA (1317bp) protein (439aa)
Arabinose efflux permease family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CP62_9FLAO
Multidrug transporter {ECO:0000313|EMBL:KFE98038.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
major facilitator superfamily protein
SCN18_13_7_16_R1_B_scaffold_334_trna_1
unknown

Not on your lists

comp(13441..13511)
DNA (71bp)
transferRNA Gln
SCN18_13_7_16_R1_B_scaffold_334_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13656..14045
DNA (390bp) protein (130aa)
Nuclear protein SET n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDP1_NIAKG
Nuclear protein SET {ECO:0000313|EMBL:KIC94124.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
nuclear protein SET
SCN18_13_7_16_R1_B_scaffold_334_19
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14371..23106
DNA (8736bp) protein (2912aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YH38_9DELT
NdvB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_13_7_16_R1_B_scaffold_334_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23508..24230
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003695F4F
Membrane protein {ECO:0000313|EMBL:KIC89550.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_334_21
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24385..26796
DNA (2412bp) protein (804aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2G2_PALPW
Uncharacterized protein {ECO:0000313|EMBL:KIA94342.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
SCN18_13_7_16_R1_B_scaffold_334_22
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26804..28978
DNA (2175bp) protein (725aa)
Alpha-glucosidase {ECO:0000313|EMBL:AEE51608.1}; EC=3.2.1.20 {ECO:0000313|EMBL:AEE51608.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
alpha-glucosidase n=1 Tax=Rudanella lutea RepID=UPI0003653888
alpha-glucosidase
SCN18_13_7_16_R1_B_scaffold_334_23
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29108..30535)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000365FB1D
Acetylgalactosaminidase {ECO:0000313|EMBL:KIC91384.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
alpha-N-acetylgalactosaminidase
SCN18_13_7_16_R1_B_scaffold_334_24
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31038..31334)
DNA (297bp) protein (99aa)
SCN18_13_7_16_R1_B_scaffold_334_25
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31608..32042
DNA (435bp) protein (145aa)
SCN18_13_7_16_R1_B_scaffold_334_26
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32112..33932)
DNA (1821bp) protein (607aa)
Alkaline phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM68_NIAKG
alkaline phosphatase
Alkaline phosphatase {ECO:0000313|EMBL:AEV99841.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_334_27
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34007..35671)
DNA (1665bp) protein (555aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXC6_PEDHD
SCN18_13_7_16_R1_B_scaffold_334_28
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35894..37000)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUV1_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48127.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCN18_13_7_16_R1_B_scaffold_334_29
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


37158..37394
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR08_NIAKG
50S ribosomal protein L28P
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 59 in total

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