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SCN18_13_7_16_R1_B_scaffold_676

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_676_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

314..841
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:51 RepID=R7DGE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD89038.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
SCN18_13_7_16_R1_B_scaffold_676_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(885..1205)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000380A2A6
Uncharacterized protein {ECO:0000313|EMBL:ELR68283.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
XRE family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_676_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1564..3561)
DNA (1998bp) protein (666aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379CAAA
Uncharacterized protein {ECO:0000313|EMBL:AHF16813.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_676_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3580..6738)
DNA (3159bp) protein (1053aa)
TonB-dependent receptor plug n=1 Tax=Niabella soli DSM 19437 RepID=H1NTM8_9SPHI
TonB-linked outer membrane protein {ECO:0000313|EMBL:AHF16812.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB-linked outer membrane protein
SCN18_13_7_16_R1_B_scaffold_676_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6761..7510)
DNA (750bp) protein (250aa)
Transcriptional regulator, DeoR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8M4_NIAKG
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEW00196.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_676_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7726..8337)
DNA (612bp) protein (204aa)
SCN18_13_7_16_R1_B_scaffold_676_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8565..11048
DNA (2484bp) protein (828aa)
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFM3_NIAKG
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEV99462.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_676_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11155..12315
DNA (1161bp) protein (387aa)
Calcium/proton antiporter n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11TL9_CYTH3
Ionic transporter y4hA {ECO:0000313|EMBL:KIA82578.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
chaA; calcium/proton antiporter
SCN18_13_7_16_R1_B_scaffold_676_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12439..13338
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F7928
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17986.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_676_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13566..14015
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1U4_9FLAO
MarR family transcriptional regulator {ECO:0000313|EMBL:KFF11003.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
marR2; MarR family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_676_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14016..15596
DNA (1581bp) protein (527aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6W1_NIAKG
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AEV97964.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_676_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15903..16472
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor n=2 Tax=Sphingobacterium spiritivorum RepID=C2FTN4_9SPHI
RNA polymerase {ECO:0000313|EMBL:KIA96510.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
RNA polymerase sigma-70 factor
SCN18_13_7_16_R1_B_scaffold_676_13
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16604..17626
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HU70_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59037.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
anti-feci sigma factor, fecr
SCN18_13_7_16_R1_B_scaffold_676_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17776..21204
DNA (3429bp) protein (1143aa)
TonB-dependent receptor n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J419_CYCMS
TonB-dependent receptor {ECO:0000313|EMBL:AEL26685.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
TonB-dependent receptor
SCN18_13_7_16_R1_B_scaffold_676_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21215..22894
DNA (1680bp) protein (560aa)
Putative nutrient binding outer membrane protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WKQ9_9BACT
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR67299.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
RagB/SusD domain-containing protein
SCN18_13_7_16_R1_B_scaffold_676_16
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23112..25307
DNA (2196bp) protein (732aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F6E05
xylan esterase
Tax=RBG_13_Bacteroidetes_42_15_curated
SCN18_13_7_16_R1_B_scaffold_676_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25353..27554
DNA (2202bp) protein (734aa)
Xylan esterase id=4252902 bin=GWC2_Bacteroidetes_40_22 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
xylan esterase
Tax=RBG_13_Bacteroidetes_42_15_curated
SCN18_13_7_16_R1_B_scaffold_676_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27626..29191
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EAE33
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02382.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCN18_13_7_16_R1_B_scaffold_676_19
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29263..30636
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003624BDC
oxidoreductase domain-containing protein
Tax=GWA2_Bacteroidetes_40_15_curated
SCN18_13_7_16_R1_B_scaffold_676_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30726..31916
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366EF21
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCN18_13_7_16_R1_B_scaffold_676_21
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32034..33332
DNA (1299bp) protein (433aa)
FolC bifunctional protein {ECO:0000313|EMBL:AEV98442.1}; EC=6.3.2.17 {ECO:0000313|EMBL:AEV98442.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
FolC bifunctional protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFL1_NIAKG
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Displaying 21 items

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