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SCN18_13_7_16_R1_B_scaffold_750

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_750_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(81..3158)
DNA (3078bp) protein (1026aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A3021
Electron transport protein {ECO:0000313|EMBL:EPR67932.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
membrane-bound dehydrogenase domain-containing protein
SCN18_13_7_16_R1_B_scaffold_750_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3209..4654)
DNA (1446bp) protein (482aa)
Alkaline ceramidase domain protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V6G6_9BACT
Alkaline ceramidase domain protein {ECO:0000313|EMBL:EPR65536.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_750_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4690..4866)
DNA (177bp) protein (59aa)
SCN18_13_7_16_R1_B_scaffold_750_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4904..6430)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E71
hypothetical protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCN18_13_7_16_R1_B_scaffold_750_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6553..7824)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5S6H7_9PLAN
Marine sediment metagenome DNA, contig: S01H1_L01022 {ECO:0000313|EMBL:GAF73688.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_750_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8463..9062)
DNA (600bp) protein (200aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4T9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM36839.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
SCN18_13_7_16_R1_B_scaffold_750_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9363..10424)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003600108
L-threonine aldolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_13_7_16_R1_B_scaffold_750_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10514..10645)
DNA (132bp) protein (44aa)
SCN18_13_7_16_R1_B_scaffold_750_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10714..11571
DNA (858bp) protein (286aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV4_9SPHI
RNA polymerase sigma factor rpoD
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:AHF14910.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_750_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11705..11911
DNA (207bp) protein (69aa)
SCN18_13_7_16_R1_B_scaffold_750_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11926..12057
DNA (132bp) protein (44aa)
SCN18_13_7_16_R1_B_scaffold_750_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12125..13072
DNA (948bp) protein (316aa)
Thioredoxin reductase {ECO:0000313|EMBL:AEV97289.1}; EC=1.8.1.9 {ECO:0000313|EMBL:AEV97289.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Thioredoxin reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE98_NIAKG
thioredoxin reductase
SCN18_13_7_16_R1_B_scaffold_750_13
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13133..13492
DNA (360bp) protein (120aa)
Dihydroneopterin aldolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE99_NIAKG
dihydroneopterin aldolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_13_7_16_R1_B_scaffold_750_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13489..14241
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FDDCC
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_13_7_16_R1_B_scaffold_750_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14343..16292
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VSI9_9SPHI
peptidase M1
Peptidase M1 {ECO:0000313|EMBL:AIM36603.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
SCN18_13_7_16_R1_B_scaffold_750_16
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16289..16582
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVM2_NITWN
Uncharacterized protein {ECO:0000313|EMBL:KKP85692.1}; TaxID=1618727 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_35_8.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_750_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16634..18784
DNA (2151bp) protein (717aa)
Quinoprotein glucose dehydrogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKA0_CHIPD
Putative oxidoreductase {ECO:0000313|EMBL:GAO44857.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
quinoprotein glucose dehydrogenase
SCN18_13_7_16_R1_B_scaffold_750_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19206..19952)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369D51A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63235.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_13_7_16_R1_B_scaffold_750_19
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20022..20960)
DNA (939bp) protein (313aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niabella soli DSM 19437 RepID=H1NRK5_9SPHI
xylose isomerase
Xylose isomerase {ECO:0000313|EMBL:AHF15477.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_750_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21192..22784)
DNA (1593bp) protein (531aa)
Peptide chain release factor 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB6_NIAKG
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
peptide chain release factor 3 (bRF-3)
SCN18_13_7_16_R1_B_scaffold_750_21
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22812..25331)
DNA (2520bp) protein (840aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003816385
Zinc carboxypeptidase {ECO:0000313|EMBL:KIC89434.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
peptidase M14 carboxypeptidase A
SCN18_13_7_16_R1_B_scaffold_750_22
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25433..27160
DNA (1728bp) protein (576aa)
Gamma-glutamyltransferase {ECO:0000313|EMBL:AEV96803.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AEV96803.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Gamma-glutamyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQR9_NIAKG
gamma-glutamyltransferase
SCN18_13_7_16_R1_B_scaffold_750_23
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27555..28031
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5B8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ29002.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_750_24
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28148..28474)
DNA (327bp) protein (109aa)
Small multidrug resistance protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5L9_SPHS2
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ADZ79828.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_13_7_16_R1_B_scaffold_750_25
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28570..29139)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEB7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98327.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_750_26
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29243..29782
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQR8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96802.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_750_27
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29970..30533
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003684E05
Uncharacterized protein {ECO:0000313|EMBL:GAO43306.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
Displaying 27 items

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