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SCN18_13_7_16_R1_B_scaffold_1644

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1644_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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598..1545
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Aliivibrio logei RepID=UPI0002E5B9E8
Uncharacterized protein {ECO:0000313|EMBL:AJQ49176.1}; TaxID=1384061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S13.1.2.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1644_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1700..1960
DNA (261bp) protein (87aa)
SCN18_13_7_16_R1_B_scaffold_1644_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2370..3167
DNA (798bp) protein (266aa)
CRISPR-associated endoribonuclease cas6 n=1 Tax=Myroides odoratimimus CCUG 10230 RepID=H1GKL7_9FLAO
CRISPR-associated endoribonuclease {ECO:0000256|PIRNR:PIRNR005054}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
CRISPR-associated protein Cas6
SCN18_13_7_16_R1_B_scaffold_1644_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3304..3708
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLG5_9SPHI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF14825.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_1644_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4280..5695
DNA (1416bp) protein (472aa)
Crispr-associated cxxc_cxxc protein Cst1 n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVQ1_9BACT
Crispr-associated cxxc_cxxc protein Cst1 {ECO:0000313|EMBL:EAY25594.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1644_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5713..6801
DNA (1089bp) protein (363aa)
Crispr-associated regulatory protein, devr family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVQ0_9BACT
Crispr-associated regulatory protein, devr family {ECO:0000313|EMBL:EAY25593.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
DevR family CRISPR-associated autoregulator
SCN18_13_7_16_R1_B_scaffold_1644_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6805..7473
DNA (669bp) protein (223aa)
Crispr-associated protein Cas5, tneap subtype n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVP9_9BACT
Crispr-associated protein Cas5, tneap subtype {ECO:0000313|EMBL:EAY25592.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
Cas5 family CRISPR-associated protein
SCN18_13_7_16_R1_B_scaffold_1644_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7474..9774
DNA (2301bp) protein (767aa)
Dead/deah box helicase, fused to N-terminal hd domain n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVP8_9BACT
Dead/deah box helicase, fused to N-terminal hd domain {ECO:0000313|EMBL:EAY25591.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
CRISPR-associated helicase Cas3
SCN18_13_7_16_R1_B_scaffold_1644_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9850..10380
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00036D188B
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:BAR49596.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
cas4; CRISPR-associated protein Cas4
SCN18_13_7_16_R1_B_scaffold_1644_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10541..10969
DNA (429bp) protein (143aa)
hypothetical protein ANA_C20489 id=1863101 bin=GWD2_Bacteroidetes_40_43 species=Anabaena sp. 90 genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
SCN18_13_7_16_R1_B_scaffold_1644_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10966..11970
DNA (1005bp) protein (335aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Myroides odoratimimus CCUG 10230 RepID=H1GKL1_9FLAO
CRISPR-associated protein Cas1
SCN18_13_7_16_R1_B_scaffold_1644_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11972..12235
DNA (264bp) protein (88aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MEX1_9SPHI
CRISPR-associated protein Cas2
Displaying 12 items

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