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SCN18_13_7_16_R1_B_scaffold_1339

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1339_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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293..1288
DNA (996bp) protein (332aa)
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1339_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1248..1703)
DNA (456bp) protein (152aa)
SCN18_13_7_16_R1_B_scaffold_1339_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2092..3735)
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=CH60_PARL1
chaperonin GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_13_7_16_R1_B_scaffold_1339_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3773..4087)
DNA (315bp) protein (105aa)
molecular chaperone GroES n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314F3CB
molecular chaperone GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_13_7_16_R1_B_scaffold_1339_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4316..5164)
DNA (849bp) protein (283aa)
Methyltransferase type 11 n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3I5_BEUC1
Methyltransferase type 11 {ECO:0000313|EMBL:KGM31782.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
type 11 methyltransferase
SCN18_13_7_16_R1_B_scaffold_1339_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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5206..5691
DNA (486bp) protein (162aa)
thioesterase superfamily protein
thioesterase superfamily protein id=12550089 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCN18_13_7_16_R1_B_scaffold_1339_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6236..7219)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000368E8B8
putative metal-dependent hydrolase with the TIM-barrel fold
Tax=RBG_16_Deltaproteobacteria_54_11_curated
SCN18_13_7_16_R1_B_scaffold_1339_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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7331..8416
DNA (1086bp) protein (362aa)
2-nitropropane dioxygenase-like protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHE6_PHEZH
2-nitropropane dioxygenase
2-nitropropane dioxygenase-like protein {ECO:0000313|EMBL:ACG77406.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_13_7_16_R1_B_scaffold_1339_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8413..8922
DNA (510bp) protein (170aa)
SCN18_13_7_16_R1_B_scaffold_1339_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8941..9705)
DNA (765bp) protein (255aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Serratia marcescens FGI94 RepID=L0MES9_SERMA
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGB81280.1}; TaxID=1249634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens FGI94.;"
SCN18_13_7_16_R1_B_scaffold_1339_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9729..10763)
DNA (1035bp) protein (345aa)
aphA; Acetylpolyamine aminohydrolase (EC:3.5.1.98)
Putative acetylpolyamine aminohydrolase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZSF8_PSEAC
Putative acetylpolyamine aminohydrolase {ECO:0000313|EMBL:GAD64022.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
SCN18_13_7_16_R1_B_scaffold_1339_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10760..11599)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8Z7_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70830.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_13_7_16_R1_B_scaffold_1339_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11691..12824
DNA (1134bp) protein (378aa)
Alanine racemase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQQ4_PARL1
alanine racemase domain-containing protein
Alanine racemase domain protein {ECO:0000313|EMBL:ABS62237.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_13_7_16_R1_B_scaffold_1339_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12915..13376
DNA (462bp) protein (154aa)
Putative transmembrane protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KKF7_RHISN
membrane protein
Tax=BJP_IG2102_BRC1_58_13
SCN18_13_7_16_R1_B_scaffold_1339_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13536..14354
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Plasmodium yoelii 17X RepID=V7PRD0_9APIC
Uncharacterized protein {ECO:0000313|EMBL:EUD74323.1}; TaxID=138298 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).;" source="Plasmodium vinckei petteri.;"
SCN18_13_7_16_R1_B_scaffold_1339_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14493..15002
DNA (510bp) protein (170aa)
CW-type zinc finger domain-containing protein n=1 Tax=Plasmodium cynomolgi strain B RepID=K6UTA6_9APIC
CW-type zinc finger domain-containing protein {ECO:0000313|EMBL:GAB65325.1}; TaxID=1120755 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).;" source="Plasmodium cynomolgi strain B.;"
SCN18_13_7_16_R1_B_scaffold_1339_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15165..15986
DNA (822bp) protein (274aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
alanine dehydrogenase n=1 Tax=Singularimonas variicoloris RepID=UPI00037B9491
alanine dehydrogenase
Displaying 17 items

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