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SCN18_13_7_16_R1_B_scaffold_1564

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1564_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1..393
DNA (393bp) protein (131aa)
Beta-lactamase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR67_PARL1
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABS62400.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_13_7_16_R1_B_scaffold_1564_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(547..768)
DNA (222bp) protein (74aa)
SCN18_13_7_16_R1_B_scaffold_1564_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

826..1575
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWY3_9PROT
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:KJB91171.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Mlr8238 protein
SCN18_13_7_16_R1_B_scaffold_1564_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1582..2436)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003803D93
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:GAK45583.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
mechanosensitive ion channel protein MscS
SCN18_13_7_16_R1_B_scaffold_1564_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2528..3391
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00037C797A
nuclease
Nuclease {ECO:0000313|EMBL:AIB10494.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_13_7_16_R1_B_scaffold_1564_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3410..3958)
DNA (549bp) protein (183aa)
CarD family transcriptional regulator n=1 Tax=Meganema perideroedes RepID=UPI00037331F6
CarD-like transcriptional regulator
Transcriptional regulator, CarD family {ECO:0000313|EMBL:AGT08440.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCN18_13_7_16_R1_B_scaffold_1564_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4279..4617)
DNA (339bp) protein (113aa)
4Fe-4S ferredoxin n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LMZ4_9RHIZ
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:CDP51841.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
4Fe-4S ferredoxin
SCN18_13_7_16_R1_B_scaffold_1564_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4647..4934)
DNA (288bp) protein (96aa)
S4 domain protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTJ6_RUEPO
S4 domain protein
S4 domain protein {ECO:0000313|EMBL:AAV94705.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCN18_13_7_16_R1_B_scaffold_1564_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5056..7452)
DNA (2397bp) protein (799aa)
Helicase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTT4_PARL1
helicase domain-containing protein
Helicase domain protein {ECO:0000313|EMBL:ABS63317.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_13_7_16_R1_B_scaffold_1564_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7801..9969
DNA (2169bp) protein (723aa)
Methylmalonyl-CoA mutase n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KNT9_RHOSK
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ACM00367.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
methylmalonyl-CoA mutase
SCN18_13_7_16_R1_B_scaffold_1564_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9990..10859)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377B707
SCN18_13_7_16_R1_B_scaffold_1564_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10972..11967
DNA (996bp) protein (332aa)
LAO/AO transport system ATPase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTU1_PARL1
arginine/ornithine transport system ATPase
LAO/AO transport system ATPase {ECO:0000313|EMBL:ABS63324.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_13_7_16_R1_B_scaffold_1564_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12080..12334
DNA (255bp) protein (85aa)
50S ribosomal protein L28 n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000379DD32
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
rpmB; 50S ribosomal protein L28
SCN18_13_7_16_R1_B_scaffold_1564_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12351..14213)
DNA (1863bp) protein (621aa)
Cobalt chelatase, pCobT subunit {ECO:0000313|EMBL:ABS63331.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ABS63331.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Cobalt chelatase, pCobT subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTU8_PARL1
cobalt chelatase large subunit
SCN18_13_7_16_R1_B_scaffold_1564_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14210..15205)
DNA (996bp) protein (332aa)
cobS; Aerobic cobaltochelatase CobS subunit (EC:6.6.1.2)
Cobalt chelatase, pCobS small subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTU9_PARL1
Cobalt chelatase, pCobS small subunit {ECO:0000313|EMBL:GAK45421.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCN18_13_7_16_R1_B_scaffold_1564_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15289..15885)
DNA (597bp) protein (199aa)
molecular chaperone DnaJ n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A01BAC
DnaJ-class molecular chaperone with C-terminal Zn finger domain
Molecular chaperone DnaJ {ECO:0000313|EMBL:ESW82474.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCN18_13_7_16_R1_B_scaffold_1564_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15969..16244
DNA (276bp) protein (92aa)
BolA family protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THE0_TISMK
BolA family protein
BolA family protein {ECO:0000313|EMBL:AFK52178.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_13_7_16_R1_B_scaffold_1564_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16241..17539)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D717F7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63335.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_13_7_16_R1_B_scaffold_1564_19
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17593..18687)
DNA (1095bp) protein (365aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
3-dehydroquinate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTV3_PARL1
3-dehydroquinate synthase
SCN18_13_7_16_R1_B_scaffold_1564_20
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18684..18827)
DNA (144bp) protein (48aa)
Displaying 20 items

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