ggKbase home page

SCN18_13_7_16_R1_B_scaffold_1794

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1794_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..580)
DNA (579bp) protein (193aa)
aldo/keto reductase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BB944
oxidoreductase, aldo/keto reductase family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_13_7_16_R1_B_scaffold_1794_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

710..1828
DNA (1119bp) protein (373aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRL4_PARL1
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:GAK45151.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
acyl-CoA dehydrogenase domain-containing protein
SCN18_13_7_16_R1_B_scaffold_1794_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1838..2845
DNA (1008bp) protein (336aa)
Acyl-CoA dehydrogenase domain protein id=4894731 bin=GWC2_Methylomirabilis_70_16 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_13_7_16_R1_B_scaffold_1794_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2956..3744)
DNA (789bp) protein (263aa)
Putative short-chain dehydrogenase/reductase SDR family protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ELQ4_BRASB
short-chain dehydrogenase/reductase SDR family protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_13_7_16_R1_B_scaffold_1794_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3931..5070
DNA (1140bp) protein (380aa)
ABC transporter, permease protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT89_RHOCS
ABC transporter permease
ABC transporter, permease protein, putative {ECO:0000313|EMBL:ACI98847.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_13_7_16_R1_B_scaffold_1794_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5067..5852
DNA (786bp) protein (262aa)
Putative ABC transporter, ATP-binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APJ4_AZOBR
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY41106.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative ABC transporter, ATP-binding protein
SCN18_13_7_16_R1_B_scaffold_1794_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5864..6754
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APJ5_AZOBR
conserved protein of unknown function; mammalian cell entry related domain
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIB13897.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_13_7_16_R1_B_scaffold_1794_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6751..7398
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIA4_AZOL4
Lipoprotein {ECO:0000313|EMBL:KJR62361.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1794_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7466..8953
DNA (1488bp) protein (496aa)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCZ0_9CYAN
membrane bound O-acyl transferase MBOAT family protein
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:AGY56713.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCN18_13_7_16_R1_B_scaffold_1794_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8953..10104
DNA (1152bp) protein (384aa)
SCN18_13_7_16_R1_B_scaffold_1794_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10047..10871
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ74_PARL1
Putative tetratricopeptide repeat family protein {ECO:0000313|EMBL:CDO60150.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1794_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11417..11911
DNA (495bp) protein (165aa)
Transcriptional regulator (TetR-family) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F484_9RHIZ
Transcriptional regulator (TetR-family) {ECO:0000313|EMBL:CCV10943.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
TetR family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_1794_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11931..12065)
DNA (135bp) protein (45aa)
transposase IS4 n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003826745
Transposase {ECO:0000313|EMBL:EXS69975.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
transposase, IS4
Displaying 13 items

View Taxonomy