ggKbase home page

SCN18_13_7_16_R1_B_scaffold_4415

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_4415_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1422
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00036604A6
Uncharacterized protein {ECO:0000313|EMBL:KKN58320.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sulfatase
SCN18_13_7_16_R1_B_scaffold_4415_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1486..3570
DNA (2085bp) protein (695aa)
Pimeloyl-CoA synthetase n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HIE2_ACHXA
6-carboxyhexanoate--CoA ligase {ECO:0000313|EMBL:ETR76191.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
pimeloyl-CoA synthetase
SCN18_13_7_16_R1_B_scaffold_4415_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3542..4546)
DNA (1005bp) protein (335aa)
Transcriptional regulator n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NU16_9GAMM
LysR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_13_7_16_R1_B_scaffold_4415_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4760..5569
DNA (810bp) protein (270aa)
ilvB; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Acetolactate synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH36_NITGG
SCN18_13_7_16_R1_B_scaffold_4415_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5566..6345
DNA (780bp) protein (260aa)
IlvB_2; acetolactate synthase catalytic subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXX8_METKA
Acetolactate synthase catalytic subunit {ECO:0000313|EMBL:KIF42685.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
SCN18_13_7_16_R1_B_scaffold_4415_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6347..7711
DNA (1365bp) protein (455aa)
Major facilitator family transporter n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z1W8_9GAMM
Major facilitator family transporter {ECO:0000313|EMBL:EAW41942.1}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2080.;"
major facilitator superfamily transporter
Displaying 6 items

View Taxonomy