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SCN18_13_7_16_R1_B_scaffold_383

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_383_1

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3..140
DNA (138bp) protein (46aa)
Transposase family protein n=2 Tax=mine drainage metagenome RepID=T1B887_9ZZZZ
Transposase family protein {ECO:0000313|EMBL:EQD38388.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_383_2
unknown

Not on your lists

158..256
DNA (99bp) protein (33aa)

This feature has no annotations

SCN18_13_7_16_R1_B_scaffold_383_3
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(323..1138)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003810F15
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS17402.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_13_7_16_R1_B_scaffold_383_4
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1202..1699)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003670AA3
Uncharacterized protein {ECO:0000313|EMBL:EJE54349.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_383_5
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1821..2471
DNA (651bp) protein (217aa)
glutathione S-transferase n=1 Tax=Acidovorax radicis RepID=UPI000237836A
glutathione S-transferase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCN18_13_7_16_R1_B_scaffold_383_6
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2526..3350)
DNA (825bp) protein (275aa)
Unsaturated acyl-CoA hydratase {ECO:0000313|EMBL:EIK88955.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EIK88955.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Unsaturated acyl-CoA hydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIB5_9BURK
unsaturated acyl-CoA hydratase
SCN18_13_7_16_R1_B_scaffold_383_7
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3467..4063
DNA (597bp) protein (199aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237836D
multiple antibiotic resistance (marc)-like protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCN18_13_7_16_R1_B_scaffold_383_8
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4073..5044)
DNA (972bp) protein (324aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003769141
Uncharacterized protein {ECO:0000313|EMBL:GAD23019.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_383_9
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5100..6110)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1I4_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94768.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_13_7_16_R1_B_scaffold_383_10
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6245..6526
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWF0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB82893.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_13_7_16_R1_B_scaffold_383_11
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6566..7684)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00035F46EC
membrane protein AbrB
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_13_7_16_R1_B_scaffold_383_12
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7702..8568
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYW6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44189.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCN18_13_7_16_R1_B_scaffold_383_13
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8584..9300)
DNA (717bp) protein (239aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B5K8_9RHIZ
PpiC-type peptidyl-prolyl cis-trans isomerase
SCN18_13_7_16_R1_B_scaffold_383_14
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9300..10004)
DNA (705bp) protein (235aa)
nitrate reductase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000302AD12
respiratory nitrate reductase subunit gamma
Respiratory nitrate reductase subunit gamma {ECO:0000313|EMBL:AGK58307.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_13_7_16_R1_B_scaffold_383_15
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10018..10680)
DNA (663bp) protein (221aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BCP6_9RHIZ
nitrate reductase molybdenum cofactor assembly chaperone
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCN18_13_7_16_R1_B_scaffold_383_16
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10680..12221)
DNA (1542bp) protein (514aa)
Nitrate reductase A subunit beta n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDU8_9RHIZ
narH; nitrate reductase A subunit beta
Nitrate reductase A subunit beta {ECO:0000313|EMBL:AGK58305.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_13_7_16_R1_B_scaffold_383_17
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12218..15985)
DNA (3768bp) protein (1256aa)
nitrate reductase A subunit alpha n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EDA519
respiratory nitrate reductase subunit alpha NarG
Respiratory nitrate reductase subunit alpha NarG {ECO:0000313|EMBL:AGK58304.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_13_7_16_R1_B_scaffold_383_18
unknown

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comp(16066..16203)
DNA (138bp) protein (46aa)

This feature has no annotations

SCN18_13_7_16_R1_B_scaffold_383_19
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16249..16737)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DNL0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU80377.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
signal peptide protein
SCN18_13_7_16_R1_B_scaffold_383_20
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16870..17718
DNA (849bp) protein (283aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Formyltetrahydrofolate deformylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIA6_9BURK
purU; formyltetrahydrofolate deformylase
SCN18_13_7_16_R1_B_scaffold_383_21
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17962..19005
DNA (1044bp) protein (348aa)
Twitching mobility protein PilT n=1 Tax=Variovorax paradoxus B4 RepID=T1XIU5_VARPD
twitching motility protein
Twitching mobility protein PilT {ECO:0000313|EMBL:AGU52035.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_13_7_16_R1_B_scaffold_383_22
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19075..20211
DNA (1137bp) protein (379aa)
twitching motility protein PilT n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000366E078
twitching motility protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_13_7_16_R1_B_scaffold_383_23
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20251..21159
DNA (909bp) protein (303aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ABE42358.1}; EC=1.1.1.60 {ECO:0000313|EMBL:ABE42358.1};; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
2-hydroxy-3-oxopropionate reductase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GI4_POLSJ
SCN18_13_7_16_R1_B_scaffold_383_24
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21170..21943)
DNA (774bp) protein (258aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Acidovorax sp. CF316 RepID=J1EPR7_9BURK
transport-associated protein
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:EJE54231.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCN18_13_7_16_R1_B_scaffold_383_25
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21940..22542)
DNA (603bp) protein (201aa)
Phosphoheptose isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC1_ALIDB
phosphoheptose isomerase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_13_7_16_R1_B_scaffold_383_26
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22623..26633)
DNA (4011bp) protein (1337aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWK3_ALIDB
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ADU99526.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
delta-1-pyrroline-5-carboxylate dehydrogenase
SCN18_13_7_16_R1_B_scaffold_383_27
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26718..27110)
DNA (393bp) protein (131aa)
UPF0102 protein Aave_0630 n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=Y630_ACIAC
hypothetical protein
UPF0102 protein Aave_0630 {ECO:0000255|HAMAP-Rule:MF_00048}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCN18_13_7_16_R1_B_scaffold_383_28
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27129..28052
DNA (924bp) protein (308aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Putative ribosomal RNA small subunit methyltransferase I n=1 Tax=Variovorax paradoxus B4 RepID=T1XHP4_VARPD
putative ribosomal RNA small subunit methyltransferase I
SCN18_13_7_16_R1_B_scaffold_383_29
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28113..29360)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00037F4479
nucleoside recognition domain-containing protein
Nucleoside recognition domain-containing protein {ECO:0000313|EMBL:GAO25754.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_13_7_16_R1_B_scaffold_383_30
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29417..30217)
DNA (801bp) protein (267aa)
SEC-C motif domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5C5_VARPE
Variovorax paradoxus strain MEDvA23 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36661.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
sec-c motif domain-containing protein
Displaying items 1-30 of 60 in total

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