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SCN18_13_7_16_R1_B_scaffold_2166

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_2166_1
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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3..254
DNA (252bp) protein (84aa)
Spermidine/putrescine ABC transporter n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RKH4_MYCPH
Spermidine/putrescine ABC transporter {ECO:0000313|EMBL:EID11627.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
SCN18_13_7_16_R1_B_scaffold_2166_2
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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304..1389
DNA (1086bp) protein (362aa)
Spermidine/putrescine ABC transporter n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RKH4_MYCPH
Spermidine/putrescine ABC transporter {ECO:0000313|EMBL:EID11627.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
potD; spermidine/putrescine ABC transporter
SCN18_13_7_16_R1_B_scaffold_2166_3
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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1392..2249
DNA (858bp) protein (286aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JWF8_9MYCO
Ornithine carbamoyltransferase {ECO:0000313|EMBL:EID11619.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
binding-protein-dependent transport system inner membrane protein
SCN18_13_7_16_R1_B_scaffold_2166_4
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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2249..3148
DNA (900bp) protein (300aa)
Spermidine/putrescine transport system permease n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RKG5_MYCPH
Spermidine/putrescine transport system permease {ECO:0000313|EMBL:EID11618.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
potB; ABC transporter permease
SCN18_13_7_16_R1_B_scaffold_2166_5
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3145..4761
DNA (1617bp) protein (539aa)
FAD dependent oxidoreductase n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RKG8_MYCPH
FAD dependent oxidoreductase {ECO:0000313|EMBL:EID11621.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
FAD dependent oxidoreductase
SCN18_13_7_16_R1_B_scaffold_2166_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4751..5905
DNA (1155bp) protein (385aa)
Peptidase M20 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AD94_THEID
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AEH44828.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
SCN18_13_7_16_R1_B_scaffold_2166_7
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5902..6222
DNA (321bp) protein (107aa)
dioxygenase n=1 Tax=Nocardiopsis lucentensis RepID=UPI000346D1B1
Dioxygenase {ECO:0000313|EMBL:EST35395.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_2166_8
SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, Plasmid-like

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6280..6831
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Kocuria atrinae RepID=UPI00035C9820
Uncharacterized protein {ECO:0000313|EMBL:CDK01176.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SC6A9.28; hypothetical protein
SCN18_13_7_16_R1_B_scaffold_2166_9
SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, Plasmid-like

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6831..7754
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0R6A7_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB20608.1}; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_2166_10
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7711..8925)
DNA (1215bp) protein (405aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
Tax=RBG_16_Actinobacteria_67_10_curated
SCN18_13_7_16_R1_B_scaffold_2166_11
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8922..9761)
DNA (840bp) protein (280aa)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:EID11626.1}; EC=2.6.1.19 {ECO:0000313|EMBL:EID11626.1};; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
4-aminobutyrate aminotransferase n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RKH3_MYCPH
putative 4-aminobutyrate aminotransferase
SCN18_13_7_16_R1_B_scaffold_2166_12
unknown

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9927..10025
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 12 items

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